Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1833 |
Symbol | |
ID | 7136582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1595980 |
End bp | 1596930 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643530212 |
Product | RNA polymerase sigm-70 factor family |
Protein accession | YP_002426250 |
Protein GI | 218667581 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGACAG AGGATGCCGA CGGGGACGTT CCAGACGCCC TTGAAGAAAT AGCCGAGGTT GGACAGGACG AAGCCTGCCT CTGGCCCGAA ACGCCGGAAT TCGACGCCAT AGCCGACCCT GCCTGGGAAG CCGGGGCGTC CGATCATTTT GACGCCATAA AGCTCTATCT GCAGGAAATC GGCCATAACC CCCTGCTCAC GGCGGAGGAG GAGGTCTCCC TGGGTCTCAG CGCACAACAG GGGGATATTA CGGCTCGCAA TCGCCTGGTG GAATGCAACC TCCGTCTCGT CGTCCGCATT GCGCGCCGCT ACCAACGGCA GCACACCCTT CCGCTCCTCG ATCTCATCGA AGAGGGGAAT CTCGGATTGA TCCGTGCGGC GGAATTATTT GATCCGACGC GGGGATTTCG GTTTTCCACC TATGCCACCT GGTGGATTCG CCAGAATATA GACCGAGGCA TCATGCAGCA GTCGCGAGTG GTACGGTTGC CTACCCATAT CATCAAAAAT CTCAGCGCGG TGCTGCGCAG TTCCCGGCAG ATCGCACAAA CGATGCAGGG CGACCCTCGC GTAGAAGACG TGGCGCAGGT CATGGGCAAG TCCGTCGCCT ATGTGGAGGA CTGTCTCCAG CAGGACCGCC GTGTGGTCAG TCTGGATGCG CCCTCCCGAT GGGAGGGTAG CCCATCTTTG GCGCAAACGT TGGTGGATGC CGATCAGGCG GACCTGGGGG CTTCTCTTGA AGAACAGGAC CTCCAGAGGC AGATTCACCG AGCCCTCCTG GGTCTGGACG TGCGACATCG TACGATCCTG ATCCGTCGTT TCGGCATAGA CGGTCAGGAC GGGGCGTCCC TTTCCGCTAT CGGCAAAGAG TTGGGCGTAA GCCACGAACG GGTCAGACAG CTACAGGAGG AGGCATTGGA TCTGCTGCGC CAGCATACGG AGTTACAGTA A
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Protein sequence | MLTEDADGDV PDALEEIAEV GQDEACLWPE TPEFDAIADP AWEAGASDHF DAIKLYLQEI GHNPLLTAEE EVSLGLSAQQ GDITARNRLV ECNLRLVVRI ARRYQRQHTL PLLDLIEEGN LGLIRAAELF DPTRGFRFST YATWWIRQNI DRGIMQQSRV VRLPTHIIKN LSAVLRSSRQ IAQTMQGDPR VEDVAQVMGK SVAYVEDCLQ QDRRVVSLDA PSRWEGSPSL AQTLVDADQA DLGASLEEQD LQRQIHRALL GLDVRHRTIL IRRFGIDGQD GASLSAIGKE LGVSHERVRQ LQEEALDLLR QHTELQ
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