| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1825 |
|---|
| Symbol | ubiG |
|---|
| ID | 7134018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 1589262 |
|---|
| End bp | 1589969 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643530204 |
|---|
| Product | 3-demethylubiquinone-9 3-methyltransferase |
|---|
| Protein accession | YP_002426243 |
|---|
| Protein GI | 218667620 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | [TIGR01983] ubiquinone biosynthesis O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGTG ATCAGGCTGA AGTGAACAAA TTCGACGCCC TCTCCGGTCA GTGGTGGGAT
ACCGATGGGC CATTTCGTAC CCTGCATGAA ATCAACCCGT TGCGCCTGGA TTTTATCGCC
AGAGGCTGTG GCGGGCTGGC GGGCAAAAAG GTGCTGGACG TGGGTACCGG GGGCGGGCTC
CTCGCCGAAG CCATGGCGCG TCAGGGGGCG GAGGTTACCG GGATCGATCT CGCGGAGGAC
GGCCTGGACG TGGCGCGCGC CCATGCGGAT GCCAACCATC TCCACATCGA CTACCGGCAG
ATCGCCGTCG AGGATCTGGC CACGGAAAAA CCGGAGTATT ACGACGTGGT GACCTGCATG
GAAATGCTGG AGCATGTGCC GGATCCTGCC GCCGTGGTGG ATGCCTGCGC CCGCCTGCTC
CATCCCGGCG GAGATGCCTT TTTTGCCACC CTCAATCGCG GCCCCAAAAG CTATCTGATG
GCTATAGTCG GAGCCGAATA CGTGCTTGGA CTGCTCCCCC GCGGAACCCA CGACTATCGG
AAGTTCATCC GGCCCAGCGA GTTGCTGGCC ATGACCCACC AAAGTCATCT GCAGACCATG
GCCCTCAAGG GCATGCACTT TGACCCGATC CGCCACCGCG GGCGTCTGAG CGATGATGTC
AGCATCAACT ACCTGAGTCA GGCGCGCAAA GCAGCACCTA ATGTCTGA
|
|---|
| Protein sequence | MNSDQAEVNK FDALSGQWWD TDGPFRTLHE INPLRLDFIA RGCGGLAGKK VLDVGTGGGL
LAEAMARQGA EVTGIDLAED GLDVARAHAD ANHLHIDYRQ IAVEDLATEK PEYYDVVTCM
EMLEHVPDPA AVVDACARLL HPGGDAFFAT LNRGPKSYLM AIVGAEYVLG LLPRGTHDYR
KFIRPSELLA MTHQSHLQTM ALKGMHFDPI RHRGRLSDDV SINYLSQARK AAPNV
|
|---|
| |