| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1823 |
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| Symbol | gph-1 |
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| ID | 7134158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 1588595 |
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| End bp | 1589269 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643530203 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_002426242 |
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| Protein GI | 218666119 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAC AGGCGGCCGT ACTTTTCGAT CTCGACGGCA CCCTGGTGGA TACGGCTCCC
GATCTCGGAG CCACAGCCAA TCGGATGCGT ACCGAACGCG GTTTGCCGGC CATGCCCCTG
GAAATGCTCC GCCCGGTCGC TTCCCAGGGC GCCCGCGGCC TTTTGCGGGT GGCTTTTCAG
GTGCATCCGG AGGACCCGGA TTTTGCACCC CTGCGAGCGG AGTTTCTGGA GATTTATGCC
GCCCATATCT GCGAACGGAG CACCCTTTTC CCGGGTATGG CAAAAGCACT GACGACCCTG
TCGGAGCGCG GCTTGGCATG GGGCGTCGTA ACCAATAAAC CGGGGTTTCT GACCCTGCCT
TTGCTGAGTG CGCTCAAACT GCCCGTTGCC CCCGCCGCCA TCGTCAGCGG CGACACGACG
ACGCACGCCA AGCCTGATCC AATGCCGGTC ACCCGCGCTC TCGCCGAGAT GGGGGCCAGC
GCGGCCCGCA GCCTCATGAT CGGCGACGAT CCCCGCGATA TGGCAGCAGG CAGGGGCGCG
GGAACTCGCT GCTGGGCAGC GGCCTGGGGC TACATCGAGG CTGGTAACGA CCCGCAGCAC
TGGGGTGCCG ACCAAATCAT CCAGCGCAGT GAACAGTTAG AGTTCGCCCT TCTCCATTTC
GACGCCCCCG AGTAA
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| Protein sequence | MSEQAAVLFD LDGTLVDTAP DLGATANRMR TERGLPAMPL EMLRPVASQG ARGLLRVAFQ
VHPEDPDFAP LRAEFLEIYA AHICERSTLF PGMAKALTTL SERGLAWGVV TNKPGFLTLP
LLSALKLPVA PAAIVSGDTT THAKPDPMPV TRALAEMGAS AARSLMIGDD PRDMAAGRGA
GTRCWAAAWG YIEAGNDPQH WGADQIIQRS EQLEFALLHF DAPE
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