| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1811 |
|---|
| Symbol | |
|---|
| ID | 7136127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 1574813 |
|---|
| End bp | 1576081 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643530190 |
|---|
| Product | 2-oxo acid dehydrogenase, acyltransferase, putative |
|---|
| Protein accession | YP_002426229 |
|---|
| Protein GI | 218666017 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.210857 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCG AAATCACCAT GCCGGTATTG TCCGACACCA TGCAGACCGG TCGCCTGACG
CGCTGGAACA AGTCGGTGGG TGACGCGGTA AAAAAAGGCG AGGCCGTTGC CGAGGTCGAG
ACCGACAAGG CGATTCTGGA CGTGGAAGCC TTTTCCGATG GTTATCTCAT TGGTCCTCTG
GCCGCTGTGG ATACGGATAT CCCGGTGCGG CAGGTGATCG GTTACATCGC CGACGCGCCG
GAAGCGGCAC AGACGGACAC GGGCGGTGCG GCCAAAACCC CCACACCCGG TACACCGCCC
GCACCGCCTT CGGTTACACC CGGAGCGGTT GCAGAGAAAA AGACCGCACC GCCGGATAAA
CTGCCACCAG CCACCTCTAC GCCCGCTGCA ACACCGGCAG ATTCCGGCTC CCCGGAGAAG
CCCGCTCCCC TCCCCCAGCC GCAAGTCGTG GCACCGCAAC CCCCCCATGC CGATGGTTTA
CGGGCTTCTC CATACGCCCG CGCCCTGGCC CGGGATCTGG AACTCGACAT CCTCCAGGTC
AAGGCCGGCC CCGATGGCAC CATTCACGCC GCCCAGGTGC TGGCCGCAGC CCTCGCACCT
CAGGATGCCG ATCTGCGTAT GGGACCGCCT TATACCATCG AACGTCCCAA TATCCTGCGC
GCCGCCGTCG CCCGCAACAT GTCCGCCACG CTGAATACGC CCGCTTTCCT CATCAGCAGT
CGCTTTGCCG TGGCGCCCCT GCATGCCGCC GCCAAGACGG CCGGACTGAG CCTGACCCTT
GCTCTGAGCC GTGCCTGCGC CCTGACCGTC GCGGAAGATC CCTGGTTTAA CCACGCATGG
ACCCGGGAGG GGCTGGCCAA GCGTAGTCGG GTGGATGTGG GCATCGCCGT AGACACCGGG
AGCGGACTGA TTACCCCCGT GCTGCGTGAC GCAGCCAAAC GGCCGCTCAA GGAACTCACA
GAGGACTGGC GCATTCTGCT GGGCAAAGTC AAAAAAGGCA GGATTTATCC GGAAGACTAC
CAGGGTGCGA GTTTTTACCT CTCCAATCTT GGGGTTTTCC CGCAAATTGA GCGATTCAAT
GCCATCGTGC CGGTGGGCGC TTCCGCCATC CTTGCCGTTG CGGCGGCGGG TAGTGACGGG
CTGACCGACT TCACTCTGAG TTGCGATCAC CGGGTGATTT TCGGCGCGGA TGCCGCGCGC
TTCCTGCAAC GCCTGGGCAA GCGGCTGGAG GACCTATCCT GGCTGGCCGG TGGCGGCGGA
CAACCGTGA
|
|---|
| Protein sequence | MKTEITMPVL SDTMQTGRLT RWNKSVGDAV KKGEAVAEVE TDKAILDVEA FSDGYLIGPL
AAVDTDIPVR QVIGYIADAP EAAQTDTGGA AKTPTPGTPP APPSVTPGAV AEKKTAPPDK
LPPATSTPAA TPADSGSPEK PAPLPQPQVV APQPPHADGL RASPYARALA RDLELDILQV
KAGPDGTIHA AQVLAAALAP QDADLRMGPP YTIERPNILR AAVARNMSAT LNTPAFLISS
RFAVAPLHAA AKTAGLSLTL ALSRACALTV AEDPWFNHAW TREGLAKRSR VDVGIAVDTG
SGLITPVLRD AAKRPLKELT EDWRILLGKV KKGRIYPEDY QGASFYLSNL GVFPQIERFN
AIVPVGASAI LAVAAAGSDG LTDFTLSCDH RVIFGADAAR FLQRLGKRLE DLSWLAGGGG
QP
|
|---|
| |