Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1799 |
Symbol | |
ID | 7134053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1562460 |
End bp | 1564985 |
Gene Length | 2526 bp |
Protein Length | 841 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643530178 |
Product | alpha-glucan phosphorylase family protein |
Protein accession | YP_002426217 |
Protein GI | 218667484 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0058] Glucan phosphorylase |
TIGRFAM ID | [TIGR02094] alpha-glucan phosphorylases |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCATCG CCCCTTGCTA CCTGCTCCCG CAACTACCCG AATCACTGGC CGGCCTGGCG GAACTTGCCC TCGACCTGCG CTGGTCCTGG AGCCATGTCT CCGACACCCT CTGGCAGCAT ATTGCCCCCA AACTCTGGGA GCAGACCCAC AATCCGTGGC TGATTCTGCA GAACGCTGGC AGCGAGGCAC TCCAGCAACT GGCCCAGGAT AAAGACTTCA TCGCGGAGTT GGAGGCCTTC GTCACCGAAC ACCGCAACCG TCTCGCGCAA ACGTGCTGGT TCGGTAAAAC CTATCCTCAC CCTCCCTTCC GTCAGGTGGC CTATTTCAGC ATGGAGTTTG GTCTATCCGA GTCCCTGCCC ATCTACTCGG GCGGCCTGGG TATCCTTGCC GGCGATTGCC TGAAAACCGC CAGTGATCTC GGTGTTCCTC TGCTCGGTAT CGGCCTGCTC TGGCAGCAGG GTTATTTCCG TCAGAGTCTG GATGAGTGTG GTCGTCAGAT CGAACTCTAT CCGTACAACG ACCCCACCCA GATGCCCGTC ACCCCGGTGC GGGACGCGGC GGGCGAATGG CTGCGTCTGG AAATGCCCTT TCCCGGCCGC ACCGTCATCC TCCGCGCCTG GCAGGCACAG GTCGGCCGGG TGACCCTGTA TCTGCTCGAC AGCAACGATC CCCTCAACGC CCCCGCCGAC CGGGGCATCA CCGCCGAGCT CTATGGCGGC GGCCCGGAGA CCCGCCTGCA GCAGGAAATC TGCCTGGGCG TCGGCGGCTG GATGCTGCTG CGCCGCCTGG GTATCCAGCC GGATATCTGC CATCTCAACG AGGGGCATGC AGCCTTCGCC ATTCTCGCCC GGGCCTACAG CCATATGCGG GATCACGGTA CCGACTTCGC CTGCGCCCTC ACCGCCACCC GCGCTGGCAA TATCTTCACT ACGCACACCC CGGTCTCCGC CGGTTTCGAC CGCTTTCCGC CGGAACTGAT GACACGCTAC GTTGCCGGTG CCTCCGAGGC TTTCGGGATT GACATAGAAA CCGTCCTTGC CTTAGGCCGG GAGCATCCCG AAGACCGCCG TGAACCCTTC AACATGGCGT GGCTCGCCAT TCGCGGCAGC CTGACCGTCA ATGGCGTCAG CCGCCTGCAT GGAACCGTCA GCCGTCGCTT ATTCCAGCCT CTGTTCCCAC GCTGGCCCGA AGACGAAGTT CCCGTCACCC ACGTCACCAA CGGCGTGCAT ATGCCCTCCT GGGACTCCGC CGAAGCCGAC GCCCTGTGGA CCACATACTG CGGCAAGTCC CGCTGGCTTG GGGACCTGAA GGATATCGAA ACGGACTTTC GCCAGACCGC TGATGCCGAT ATCTGGCACC TGCGCAGCGT CGCGCGGCAG GAGGTGATCC AATTCGCCCG CCAGCGCCTG CAGCAGCAAC TGGCGGCAAC CTATGCGCCC GAAAGAGAGT GTGAACAAGC GAAAACGGCG CTCGACCCCA ACACCCTCAC CATCGGTTTC GCCCGCCGCT TTGCCGCCTA CAAGCGCCCC AACATGCTCC TGAGCGACCC GGATCGTCTG TACCGCCTGC TGAACAACCC GCGCTATCCC GTACAACTGC TGATCGCGGG CAAGGCTCAT CCCCAGGATG GCGCCGGTAA GGCCATGATC CAGCAGTGGA CCCAGTTCAT TCACCAGTAT CCCGACCTGG CCGGGCGCGT CGTCTTCATC ACCGACTATG ACATGCTGGT CGCCGAACAC CTGGTGCAGG GTGTCGACCT GTGGATCAAT ACACCGCGCC GCCCCTGGGA AGCGAGCGGT ACCAGCGGCA TGAAAGTATT GGTCAATGGC GGCCTCAATC TCTCGGAGCT GGACGGCTGG TGGGCCGAGG CCTATTGCCC GGAGGTCGGG TGGGCCCTGG GCGACGGGCA GGAACATGAT ACCGATCTGG CATGGGACCA ACAGGAAGCA CAGCAGCTCT ATCGCCTGCT GGAAGACGAA GTCGTGCCCC TCTTTTACCA CCAACGCGAT GCCAACGGCT GCCCGTGCGG CTGGGTCGGC AAAATCCGCG AAAGCATGGG CCGCCTGACC CCGCAATTCA GCACCAATCG CATGTTGCAG GAATATGTAT CCACCCTCTA CGTCCCGGCC GCACGACTTC TGGCCGCGCG CAGCGACCGC GCCACCGTTG AAGGCATCTG CAAATGGCAG CATGAAATTC GCCAGCACTG GCAAAGCGTG CATTTTGGCG AACTGAATGT GCAAAGCGAT ACCGATACCC ACCATTTTCA GGTGCCCGTA TATCTGGATG ACCTCAACCC AGACGCCGTT GCGGTACAGC TCTTCGCCAA CGGCGAGGGG GGACAGTGCC CGACCCTCTA TACCATGACG CGCGGAGAAG CCCTGAGCGG CGCCATCAAC AGCCACAATT ATCACTGTAC AGTGCCGGCC CGCCACCCGG TGGAGGCTTT TACACCCAGG ATCATCCCAT ATCGCGAGGG ATGCCTGGTC CCCCTGGAAA GTACAGAGAT ACTCTGGTAT CGCTGA
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Protein sequence | MTIAPCYLLP QLPESLAGLA ELALDLRWSW SHVSDTLWQH IAPKLWEQTH NPWLILQNAG SEALQQLAQD KDFIAELEAF VTEHRNRLAQ TCWFGKTYPH PPFRQVAYFS MEFGLSESLP IYSGGLGILA GDCLKTASDL GVPLLGIGLL WQQGYFRQSL DECGRQIELY PYNDPTQMPV TPVRDAAGEW LRLEMPFPGR TVILRAWQAQ VGRVTLYLLD SNDPLNAPAD RGITAELYGG GPETRLQQEI CLGVGGWMLL RRLGIQPDIC HLNEGHAAFA ILARAYSHMR DHGTDFACAL TATRAGNIFT THTPVSAGFD RFPPELMTRY VAGASEAFGI DIETVLALGR EHPEDRREPF NMAWLAIRGS LTVNGVSRLH GTVSRRLFQP LFPRWPEDEV PVTHVTNGVH MPSWDSAEAD ALWTTYCGKS RWLGDLKDIE TDFRQTADAD IWHLRSVARQ EVIQFARQRL QQQLAATYAP ERECEQAKTA LDPNTLTIGF ARRFAAYKRP NMLLSDPDRL YRLLNNPRYP VQLLIAGKAH PQDGAGKAMI QQWTQFIHQY PDLAGRVVFI TDYDMLVAEH LVQGVDLWIN TPRRPWEASG TSGMKVLVNG GLNLSELDGW WAEAYCPEVG WALGDGQEHD TDLAWDQQEA QQLYRLLEDE VVPLFYHQRD ANGCPCGWVG KIRESMGRLT PQFSTNRMLQ EYVSTLYVPA ARLLAARSDR ATVEGICKWQ HEIRQHWQSV HFGELNVQSD TDTHHFQVPV YLDDLNPDAV AVQLFANGEG GQCPTLYTMT RGEALSGAIN SHNYHCTVPA RHPVEAFTPR IIPYREGCLV PLESTEILWY R
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