Gene AFE_1799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1799 
Symbol 
ID7134053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1562460 
End bp1564985 
Gene Length2526 bp 
Protein Length841 aa 
Translation table11 
GC content62% 
IMG OID643530178 
Productalpha-glucan phosphorylase family protein 
Protein accessionYP_002426217 
Protein GI218667484 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0058] Glucan phosphorylase 
TIGRFAM ID[TIGR02094] alpha-glucan phosphorylases 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCATCG CCCCTTGCTA CCTGCTCCCG CAACTACCCG AATCACTGGC CGGCCTGGCG 
GAACTTGCCC TCGACCTGCG CTGGTCCTGG AGCCATGTCT CCGACACCCT CTGGCAGCAT
ATTGCCCCCA AACTCTGGGA GCAGACCCAC AATCCGTGGC TGATTCTGCA GAACGCTGGC
AGCGAGGCAC TCCAGCAACT GGCCCAGGAT AAAGACTTCA TCGCGGAGTT GGAGGCCTTC
GTCACCGAAC ACCGCAACCG TCTCGCGCAA ACGTGCTGGT TCGGTAAAAC CTATCCTCAC
CCTCCCTTCC GTCAGGTGGC CTATTTCAGC ATGGAGTTTG GTCTATCCGA GTCCCTGCCC
ATCTACTCGG GCGGCCTGGG TATCCTTGCC GGCGATTGCC TGAAAACCGC CAGTGATCTC
GGTGTTCCTC TGCTCGGTAT CGGCCTGCTC TGGCAGCAGG GTTATTTCCG TCAGAGTCTG
GATGAGTGTG GTCGTCAGAT CGAACTCTAT CCGTACAACG ACCCCACCCA GATGCCCGTC
ACCCCGGTGC GGGACGCGGC GGGCGAATGG CTGCGTCTGG AAATGCCCTT TCCCGGCCGC
ACCGTCATCC TCCGCGCCTG GCAGGCACAG GTCGGCCGGG TGACCCTGTA TCTGCTCGAC
AGCAACGATC CCCTCAACGC CCCCGCCGAC CGGGGCATCA CCGCCGAGCT CTATGGCGGC
GGCCCGGAGA CCCGCCTGCA GCAGGAAATC TGCCTGGGCG TCGGCGGCTG GATGCTGCTG
CGCCGCCTGG GTATCCAGCC GGATATCTGC CATCTCAACG AGGGGCATGC AGCCTTCGCC
ATTCTCGCCC GGGCCTACAG CCATATGCGG GATCACGGTA CCGACTTCGC CTGCGCCCTC
ACCGCCACCC GCGCTGGCAA TATCTTCACT ACGCACACCC CGGTCTCCGC CGGTTTCGAC
CGCTTTCCGC CGGAACTGAT GACACGCTAC GTTGCCGGTG CCTCCGAGGC TTTCGGGATT
GACATAGAAA CCGTCCTTGC CTTAGGCCGG GAGCATCCCG AAGACCGCCG TGAACCCTTC
AACATGGCGT GGCTCGCCAT TCGCGGCAGC CTGACCGTCA ATGGCGTCAG CCGCCTGCAT
GGAACCGTCA GCCGTCGCTT ATTCCAGCCT CTGTTCCCAC GCTGGCCCGA AGACGAAGTT
CCCGTCACCC ACGTCACCAA CGGCGTGCAT ATGCCCTCCT GGGACTCCGC CGAAGCCGAC
GCCCTGTGGA CCACATACTG CGGCAAGTCC CGCTGGCTTG GGGACCTGAA GGATATCGAA
ACGGACTTTC GCCAGACCGC TGATGCCGAT ATCTGGCACC TGCGCAGCGT CGCGCGGCAG
GAGGTGATCC AATTCGCCCG CCAGCGCCTG CAGCAGCAAC TGGCGGCAAC CTATGCGCCC
GAAAGAGAGT GTGAACAAGC GAAAACGGCG CTCGACCCCA ACACCCTCAC CATCGGTTTC
GCCCGCCGCT TTGCCGCCTA CAAGCGCCCC AACATGCTCC TGAGCGACCC GGATCGTCTG
TACCGCCTGC TGAACAACCC GCGCTATCCC GTACAACTGC TGATCGCGGG CAAGGCTCAT
CCCCAGGATG GCGCCGGTAA GGCCATGATC CAGCAGTGGA CCCAGTTCAT TCACCAGTAT
CCCGACCTGG CCGGGCGCGT CGTCTTCATC ACCGACTATG ACATGCTGGT CGCCGAACAC
CTGGTGCAGG GTGTCGACCT GTGGATCAAT ACACCGCGCC GCCCCTGGGA AGCGAGCGGT
ACCAGCGGCA TGAAAGTATT GGTCAATGGC GGCCTCAATC TCTCGGAGCT GGACGGCTGG
TGGGCCGAGG CCTATTGCCC GGAGGTCGGG TGGGCCCTGG GCGACGGGCA GGAACATGAT
ACCGATCTGG CATGGGACCA ACAGGAAGCA CAGCAGCTCT ATCGCCTGCT GGAAGACGAA
GTCGTGCCCC TCTTTTACCA CCAACGCGAT GCCAACGGCT GCCCGTGCGG CTGGGTCGGC
AAAATCCGCG AAAGCATGGG CCGCCTGACC CCGCAATTCA GCACCAATCG CATGTTGCAG
GAATATGTAT CCACCCTCTA CGTCCCGGCC GCACGACTTC TGGCCGCGCG CAGCGACCGC
GCCACCGTTG AAGGCATCTG CAAATGGCAG CATGAAATTC GCCAGCACTG GCAAAGCGTG
CATTTTGGCG AACTGAATGT GCAAAGCGAT ACCGATACCC ACCATTTTCA GGTGCCCGTA
TATCTGGATG ACCTCAACCC AGACGCCGTT GCGGTACAGC TCTTCGCCAA CGGCGAGGGG
GGACAGTGCC CGACCCTCTA TACCATGACG CGCGGAGAAG CCCTGAGCGG CGCCATCAAC
AGCCACAATT ATCACTGTAC AGTGCCGGCC CGCCACCCGG TGGAGGCTTT TACACCCAGG
ATCATCCCAT ATCGCGAGGG ATGCCTGGTC CCCCTGGAAA GTACAGAGAT ACTCTGGTAT
CGCTGA
 
Protein sequence
MTIAPCYLLP QLPESLAGLA ELALDLRWSW SHVSDTLWQH IAPKLWEQTH NPWLILQNAG 
SEALQQLAQD KDFIAELEAF VTEHRNRLAQ TCWFGKTYPH PPFRQVAYFS MEFGLSESLP
IYSGGLGILA GDCLKTASDL GVPLLGIGLL WQQGYFRQSL DECGRQIELY PYNDPTQMPV
TPVRDAAGEW LRLEMPFPGR TVILRAWQAQ VGRVTLYLLD SNDPLNAPAD RGITAELYGG
GPETRLQQEI CLGVGGWMLL RRLGIQPDIC HLNEGHAAFA ILARAYSHMR DHGTDFACAL
TATRAGNIFT THTPVSAGFD RFPPELMTRY VAGASEAFGI DIETVLALGR EHPEDRREPF
NMAWLAIRGS LTVNGVSRLH GTVSRRLFQP LFPRWPEDEV PVTHVTNGVH MPSWDSAEAD
ALWTTYCGKS RWLGDLKDIE TDFRQTADAD IWHLRSVARQ EVIQFARQRL QQQLAATYAP
ERECEQAKTA LDPNTLTIGF ARRFAAYKRP NMLLSDPDRL YRLLNNPRYP VQLLIAGKAH
PQDGAGKAMI QQWTQFIHQY PDLAGRVVFI TDYDMLVAEH LVQGVDLWIN TPRRPWEASG
TSGMKVLVNG GLNLSELDGW WAEAYCPEVG WALGDGQEHD TDLAWDQQEA QQLYRLLEDE
VVPLFYHQRD ANGCPCGWVG KIRESMGRLT PQFSTNRMLQ EYVSTLYVPA ARLLAARSDR
ATVEGICKWQ HEIRQHWQSV HFGELNVQSD TDTHHFQVPV YLDDLNPDAV AVQLFANGEG
GQCPTLYTMT RGEALSGAIN SHNYHCTVPA RHPVEAFTPR IIPYREGCLV PLESTEILWY
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