Gene AFE_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1798 
Symbol 
ID7135251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand- 
Start bp1561890 
End bp1562447 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content55% 
IMG OID643530177 
Producthypothetical protein 
Protein accessionYP_002426216 
Protein GI218666153 
COG category[S] Function unknown 
COG ID[COG3247] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACC AGATACCCGA TCTTTCCACG GTCGTCGAGG CCGAACGGAA AATGTTCGGC 
AAGTACGTGC TGCCCATCGC CGTCGTCCTG ATCATCATCG GTATTTTCGG ACTGCTGAGC 
CCGGTCATTC TGTCTGCCGC AACCGATGGC GTGCTGGCGG CCCTATTGAT CATTGCCGGA 
TTCACCTGGT TCATCCACAG CTATCAGATG CATCAGCATC ATTTGGCGGA CTGGCTCAAG 
CCGGTACTGC TGTTGGCCAC CGGCGGAGTG ATGATTGCAC TGCCCAACGC CGGCATCGCC 
GCCATCGGCC TGATGTTCAT CCTGTATTTC GTCATGGATG CCTACCGCAA CTTCACCCAG 
TCCAATGTCC ACGCCGGTCA CGGACGGGGG TGGTTTATTT TCAGCGGGGT AATCGATGTC 
GTCATAGCCA TTCTGTTTTT TGTCACCTGG CCACAGGGCT CGCTCATCCT GGTCGGTATC 
TTTGTGGGCG TAAATCTGAT TTTTGATGGC GTCATTCTGC TGATGCTCCG CAATGCCGTC 
TCCGGAGACC ATCAATAG
 
Protein sequence
MNNQIPDLST VVEAERKMFG KYVLPIAVVL IIIGIFGLLS PVILSAATDG VLAALLIIAG 
FTWFIHSYQM HQHHLADWLK PVLLLATGGV MIALPNAGIA AIGLMFILYF VMDAYRNFTQ 
SNVHAGHGRG WFIFSGVIDV VIAILFFVTW PQGSLILVGI FVGVNLIFDG VILLMLRNAV 
SGDHQ