Gene AFE_1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1797 
Symbol 
ID7137098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1560355 
End bp1561866 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content59% 
IMG OID643530176 
Productdrug resistance transporter, EmrB/QacA family 
Protein accessionYP_002426215 
Protein GI218667944 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGCAA GCGGAAATTT CGATAAAACG GGCAGCCCGC ATCTTCTCGC CATTACTGTC 
GCCGTAATGG CCTGCATCAT CATGAATGTT CTGGACATCA CGATCGTCAA CGTGGCGCTG
CCGCACATGG AGGGGTCGCT TCACGCCAAC AGCGATCAGA TTACCTGGGC ACTCACCACC
TACATGCTGG CCATGGTCAT CGTCACTCCC TTGACCGGCT TACTGGTCGA GCGCTTCGGA
CAACGCCGGC TCATCCTGTG GAGCGTGGCC GGCTTCCTGG TCTGCTCGGT CATGAGCGGA
CAATCCCACA GCCTCACGGA AATCGTTCTT TGGCGTTTCC TGCAGGGAGC ACTGGGCGCC
TCTCTGGTAC CTGTCGGGCA GGCCATTCTG GTTCAGGCGT ATCCCCGGGA GAAACGGGGG
GTAGCCATGG CGACCCTGGG CATGGGCACC ATGCTCGGTC CCATCGTCGG TCCGGTGCTC
GGCGGCTATC TCACCGAAAA TCTCTCCTGG CGTTGGTGTT TCTACGTCAA TATACCCATT
GGCATCATCG CCTTTACCAT GCTGATTTTT TACATCCCCC GCTTTGGCAA AAGCGAACAT
CCCCGGCCGA TTGATTGGCT TGGATTCGTA TGGATGGCCA TCGGGCTGGG TGCGTTGCAG
ATGATGCTCA GCCTCGGCGA TCAGGACGGC TGGTTGAGCT CCGACTTCAT CATCATCCTG
ATGTTGTCGG CGGGCACCGG CATTTTTCTC TTTGTACTGC GTTCGCTCAG CGTCGCCCAT
CCGCTGGTCG ACTTGCGCCT GCTCAAGGAT CGCTCCCTGA CCCTGGGCAG TGCGGGTATA
GGTTTATTCG GCCTCGCGCT TTATGGGACC ATGGTGATTC TGCCCATCTA TCTGCAGGAT
TATATGGGGT ACGAACCGCA AACCGCAGGC CTTGCCATGG CTCCCCAGGG CCTGGGCTCC
TGGATTTCCA TGTGGATGGC GGGACGCCTG CTCAATCGCG GGGCCAACCC CCGCTGGATG
ATCATGGCCG GAGTTTTTTT GGGTGCCACG GGCACCTGGA TCAGCCTCTC CTATAACCTG
CAGGTAAGCC CTGCCTGGAT CATCTGGCCT GGGGTGATCC GGGGCCTCGG TCTCGGCCTG
GTATCCATCC CCCTATTTAC GCTGGCTTTT GCGACCCTCA GCAAGGAGCA GACGCCGGAG
GGATCGGGGA TATTCAATCT CATGCGCAAT CTGGGCGGTT CTGTGGGCAT TGCCATCGTC
TCCACCATCA TGACCGAAGA GGCGCAGGCG GCGTGGAACC AGATGGGAGG GCATATCAGC
CCCTTCAATG CGGCATTGCC GCGTTACCTG GGTGGCGCCG GTTTGCGTCA GGGAAATCTG
ACCTGGCAGG TGCTGGGCCG GGTTCTGGCG CAGCATGCGG CAATGCGTGG TATACTGGAT
GCGTTCATGT TCCTGTTCTG GAGCTTTTTG GTCGTGATGC TCATCGCGCT ACTGATGAAG
GATAAATCCT AG
 
Protein sequence
MLASGNFDKT GSPHLLAITV AVMACIIMNV LDITIVNVAL PHMEGSLHAN SDQITWALTT 
YMLAMVIVTP LTGLLVERFG QRRLILWSVA GFLVCSVMSG QSHSLTEIVL WRFLQGALGA
SLVPVGQAIL VQAYPREKRG VAMATLGMGT MLGPIVGPVL GGYLTENLSW RWCFYVNIPI
GIIAFTMLIF YIPRFGKSEH PRPIDWLGFV WMAIGLGALQ MMLSLGDQDG WLSSDFIIIL
MLSAGTGIFL FVLRSLSVAH PLVDLRLLKD RSLTLGSAGI GLFGLALYGT MVILPIYLQD
YMGYEPQTAG LAMAPQGLGS WISMWMAGRL LNRGANPRWM IMAGVFLGAT GTWISLSYNL
QVSPAWIIWP GVIRGLGLGL VSIPLFTLAF ATLSKEQTPE GSGIFNLMRN LGGSVGIAIV
STIMTEEAQA AWNQMGGHIS PFNAALPRYL GGAGLRQGNL TWQVLGRVLA QHAAMRGILD
AFMFLFWSFL VVMLIALLMK DKS