Gene AFE_1791 details

Gene Information

• Locus tag: AFE_1791
• Symbol: scpB
• ID: 7134605
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 1556088
• End bp: 1556621
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643530170
• Product: segregation and condensation protein B
• Protein accession: YP_002426209
• Protein GI: 218665952
• COG category: [K] Transcription
• COG ID: [COG1386] Predicted transcriptional regulator containing the HTH domain
• TIGRFAM ID: [TIGR00281] segregation and condensation protein B

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTGAAG CGCTCCTGGC ATTGTTTTTG TCCAGCGCCG AGCCGCTTAC TCGCGCGCGC 
CTGGCCGATA TTTTCGACGG CGACCCTGGC TGCGCGGGAT GGGAGGCGGC GCTGGACATG 
CTGTTGGCTA CCGGCGAGGG ACCTCTGCAA CTCGTCTGTG TAGCGGGTGG CTATCGTCTG 
CAGATTCATC CGCGTCACAA CGCCCTCGTG GCGCGCCTCC ATATGGAGCC ACCACGGCCT 
TTGTCGCGGG CCACGTTGGA AACCCTGGCG GTGATTGCCT ATCAGCAGCC GGTGACCCGT 
CCGGAAATCG AGCACTGGCG TGGGGTTGCG GTCAGCGTGC AGATCATGCA GCAGCTTCAG 
GAGCGGGGCT GGATCACCAC CAGCGGACAC CGGGATACAC CGGGTCGCCC CGCGCTTTGG 
GTGACAACAC CCGGTTTTCT GGAGCATTTT TCATTGCCGT CGCTGGCTGC GTTGCCGGAG 
ATCGTGACGA TGGAAGAGGG CCAGACGGAT ATACAGGCAG GCATAACGGA CTGA 

 

Protein sequence

MREALLALFL SSAEPLTRAR LADIFDGDPG CAGWEAALDM LLATGEGPLQ LVCVAGGYRL 
QIHPRHNALV ARLHMEPPRP LSRATLETLA VIAYQQPVTR PEIEHWRGVA VSVQIMQQLQ 
ERGWITTSGH RDTPGRPALW VTTPGFLEHF SLPSLAALPE IVTMEEGQTD IQAGITD