Gene AFE_1780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1780 
Symbol 
ID7134280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1544264 
End bp1544683 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content65% 
IMG OID643530159 
Productplasmid stability protein, putative 
Protein accessionYP_002426198 
Protein GI218665399 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGTCC TGGATACCAA CGTCGTTTCC GAGGCGATGA AGCCGGAGCC AGACGCGGCC 
GTGAGGGCTT GGCTGAACGA ACAGGCGGCG GAAACCTTGT ATCTGTCGAG CGTCACGCTG
GCCGAGTTGC TGTTCGGCAT CCGGGCGCTG CCGGCGGGCA AGTGCAAGAA CATGCTCGAC
CGCGCCCTGA CCGAACTGCT GGAGCTGTTC AAGGATCGGG TGCTGCCCTT CGATACGGAT
GCAGCGCGCC ACTATGCCGA CCTGGCCGTG ACGGCCAAGA ACGGCGGGCG CGGCTTCCCG
ACGCCAGACG GCTACATCGC GGCTGTTGCC GCATCGCGGG GCTTCATCGT GGCATCACGC
GACACGTCGC CCTATGAAGC GGCCGGCGTG ACCGTCATCA ATCCCTGGAA GGATGCATGA
 
Protein sequence
MIVLDTNVVS EAMKPEPDAA VRAWLNEQAA ETLYLSSVTL AELLFGIRAL PAGKCKNMLD 
RALTELLELF KDRVLPFDTD AARHYADLAV TAKNGGRGFP TPDGYIAAVA ASRGFIVASR
DTSPYEAAGV TVINPWKDA