| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1712 |
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| Symbol | |
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| ID | 7134755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 1483680 |
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| End bp | 1485677 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643530093 |
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| Product | diguanylate cyclase, putative |
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| Protein accession | YP_002426132 |
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| Protein GI | 218665522 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGAGA CCTTAACCTT GGAGCACCAG GCCGGGCTTC TGTCGCCAGG GCTACAGCTC
CAGAAGAGCA CCGGAGATCC CTGCTGGAAA GCGTTGGGAA GTGGGCAGAG CATCATCCAA
GCCGTGGATG ATCCGCAAGC GCCGGAATGG ATCAAGGCCT TGCGCAACCA AGTAGAGGAA
ATCGGCATCT TTCCTTTCGG GACAGAGGAT TTGCGTGGCG CAGGCCTGAT CGGCGTGCGC
GAAAAGGGTT ATTTCCAACG GGTTGGATCG GCATACTTCA ATGCCTTTGC CCATCTTGGG
GAACTGGTAT TTCTGCTACG CAATCAATTT TTGCGCGATC CCCTTACCGC CCTGCCCAAC
CGCTTCCTCT TCATGGACTT CCTGGAGAAC GCCAGAAACC AAACACTGCG GCACGAGCGG
CTTCTGGGGG TAGCGATTCT GGATTTGGAC GGCTTCAAGC AGGTGAATGA CCGCTTGGGG
CATGGTGCTG GAGATCAGGT GCTGCAAGCC GTGGTGCAAA GGCTGCAGGT GCAGTTACGG
GCAGGAGACA TCCTTGCTCG TCTGGGTGGC GACGAGTTCG GCCTGATATT GCCAGACCTG
GAGCGCCTCG ACGATCTAGA CGGTGTCAGC GAACGATTAC TCGCCGCCCT CCGTGAGCCG
CTGGAAATCG ATGGTGAAGC GGCCAGCGTT ACCGGCAGCC TGGGTATCAC CCTTTTCCCA
CTGGATGACA GTGATGCCAG CACCCTAATC CGGCACGCCG ATATGGCGCT CTATGCCGCC
AAGGACGCGG GCCGGGATCA GTTTCAACTG CATAGCTTAG CCCTGGATGA GGCCATGCGG
ACTGAAGCAG GGACGCGTGC CCTGCTCGAA CAAGCGTTGC AGGAAAACCG TCTGGTGCTG
TACTACCAAC CGGTCGTGTC CAGCGCCGGA GCGGTGATAG GGGTGGAAGC CCTCATCCGC
CTGCAACACC CGGAGAGAGG CTTGATTCCA CCCGCAGCCT TTTTCTCCGC CCTGGATCAT
GTCCGCCTCG CGCGGCCCAT CGGTCGCTTT GTCCTGAACG TGGCGTTGCA TCAGGCAGCC
CTCTGGCAAG AAGCGGGCCA TCCACTGCGT GTGTCGGTCA ATATCAGCAC CCGTCACCTG
CTGGATGCCC GGTTCCTGGA GGATCTCCAG GAGATGTTGG CCAAGTACCC TGGCCTGCGG
CCGGAGCTGG TCGAGATCGA AATCACCGAG TCGGCTCCTT TGCGAGATAT GCTAGAAGCG
CAAAGACTCT TGGTCGCCTG CCATCGCTTG GGAGTACGCG TTGCCCTCGA CGACTTCGGC
ACGGGCAATG CCTCTCTGAC CTACCTCCAG CGGCTCCCTG CCGATTCCAT CAAGATCGAC
CAGAGTTTCG TGCGAGATGT GATCGATGAC CCCAAGGATC TCGCTATCGT TACAGCGGTC
ATCACGGCCA GCCGCATGCT GGGTATGAAC GTGATCGCGG AAGGGGTAGA AACGGCAGAT
CATGTCGACT TGTTGGTGAA GACGGGCTGT AACCACCTGC AAGGGTATTT TTTCTCCAAA
CCGATTCCGG CAGAGGACGT TCCTGCTTGG GTAGCCCATT TTCGCCCGGC TCCACGGACG
AAAGATTCCT TGCATCCCCT GAATATCCTG TCGCCCATCC TGGAGGGGCA CATCCTGCGC
GTACAGAAAT TCATCGGCGC ACTGCGCCAG GAAAACCCGT TTCCCGCCCA TGTTATTGAA
AAGGATGCCG AGGAGTATTG TCATCTGGGT CTGTGGTTGC GTGGGGAGGG AAAACAACGT
TTTGGTGCGA CCCCCCAATT TATGCGTCTC CTCACTCGCC ACGAACGCCT TCATCAGGTC
GCCCGTGTGG CCAAGTTGCA CTTTGATGCT GGGGATGCAG ATGGAGCCAT GGAACAGGGA
AAGCTGCTGG ATATGGAAAA TGGCTTGCTG CTGGCCGAAT TGCTGGCCAT GGCGGGTGAA
AGCCGGGATA ATATCTAG
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| Protein sequence | MGETLTLEHQ AGLLSPGLQL QKSTGDPCWK ALGSGQSIIQ AVDDPQAPEW IKALRNQVEE
IGIFPFGTED LRGAGLIGVR EKGYFQRVGS AYFNAFAHLG ELVFLLRNQF LRDPLTALPN
RFLFMDFLEN ARNQTLRHER LLGVAILDLD GFKQVNDRLG HGAGDQVLQA VVQRLQVQLR
AGDILARLGG DEFGLILPDL ERLDDLDGVS ERLLAALREP LEIDGEAASV TGSLGITLFP
LDDSDASTLI RHADMALYAA KDAGRDQFQL HSLALDEAMR TEAGTRALLE QALQENRLVL
YYQPVVSSAG AVIGVEALIR LQHPERGLIP PAAFFSALDH VRLARPIGRF VLNVALHQAA
LWQEAGHPLR VSVNISTRHL LDARFLEDLQ EMLAKYPGLR PELVEIEITE SAPLRDMLEA
QRLLVACHRL GVRVALDDFG TGNASLTYLQ RLPADSIKID QSFVRDVIDD PKDLAIVTAV
ITASRMLGMN VIAEGVETAD HVDLLVKTGC NHLQGYFFSK PIPAEDVPAW VAHFRPAPRT
KDSLHPLNIL SPILEGHILR VQKFIGALRQ ENPFPAHVIE KDAEEYCHLG LWLRGEGKQR
FGATPQFMRL LTRHERLHQV ARVAKLHFDA GDADGAMEQG KLLDMENGLL LAELLAMAGE
SRDNI
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