| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1699 |
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| Symbol | |
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| ID | 7135759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1472073 |
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| End bp | 1474577 |
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| Gene Length | 2505 bp |
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| Protein Length | 834 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643530081 |
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| Product | TraG/TraD family protein |
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| Protein accession | YP_002426120 |
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| Protein GI | 218665095 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAACA GTATCCATGC TCCCAACTCC ACCGTCTCCG ACTACAAGAT CCAGCGCCTC
GCCCGGGGCG GCAGGCTCAA GACGACGCTC GCCGGCGTTG CGGCGGGCGT TCTCGGTTAC
ACGTTGGGCA TATCCTATGT GGCTCGGGAC GTGTTTCCCG GCTACCAGTG GACCGATGAT
TTCATCCAGA AGGCGCATGC CTACATCGCA TTGCCCTACG GCTGGCGGCT ATATGATCCC
CTGCCGTTCC TGCGGCCGAT GATCCTGAAC ATCCACTATC CAGTGATTCA TCAGGCGTTC
TATGACGCCG GTCTGCCGGC CGTGGTGCTG GGCATACTCA CGGCGGGGAT ACTTGGGAAA
AAGCACAAGG ACGCGCAAAA AGCCGTCCTG GACAATCCTG TGCATGGCTC AGCGCATTGG
GCGGGTAAAA GTGATGCGAT CCGGGCGGCG CTCCTGCCTT CTCCACCGCC AAAGACGGTA
ATGGACTCCC TGCGCCCCTG GCTTGGCATG CACCCTGCGA AGGGCATGCA CCCTGCGAAG
GGCATGCACC CTGCAAAGGG CTTGCACCCT GCAAAGGGGC TCAAGGGAGG TTCCGACTGG
GCCCGCTGGC AAGAGCGGCG GGAAAAGCGG AAAAAGGAGG CCGCCGAGTG GCGGAAGAGG
AGGGCGGAGA GGGAGAAGAA ACGCCTGTCG GAGATCCCGG AGCCGACCGT TTTCGACCGG
TTCGACTCTC CCCATGTCTG CTATGTGGGG GCCTTCGTCG AGAACGGCGC GGCCACCCCA
CTCCAGCACA CCGGGGCGGA ACACATCCTG GTCTTTGCCC CGACCCGATC GGGCAAGGGC
GTGGGCCTGG TGCTGCCCAC GTTGCTGGAC GGCTGGATGG ACTCGGTGGT CGTGCATGAC
ATCAAGGGGG AAAACTTCCA CCTGACGGCG GGCTATCGCA AGGCCATGGG CCACCACATC
CTGAAGTTTT CACCGGGATC GGTATCCGAA GAAGGTTGCC ACTTCAACCC GCTGGACGCG
GTGCGTGTCG GAACCCAATA CGAAGTCAAG GACGTGATGA ACATTGCCAC GATGATTGTG
GACCCGGATG GCAAGGGCCT GAACGATCAC TGGCAGAAAA CCGGTTTTGC CCTGCTCACG
TCCATCATCC TGCATGTGCT CTACGCCATG CCGGACAAGA CCCTGCGGGG CGTTGCCGCC
TATCTCAACG ATCCCACGCT GGAAAGCGTG GACGTAGCCT TTGAGCGCAT GATGCAGACG
GAGCATGACC CGGATGAGCA ATATGGCTGG AGGGACGGCA ACGGCCAGTG CTCCAGGGTC
CATCCGGTCA TCGCGCAATC CGCGCGGGAG ATGCTGAACA AGGCCGAGAA TGAAAAATCG
GGCGTCATTT CGACCATGAT GAGCTTCCTG TCCCTCTACC GGGATCCCAT CGTCGCGAAG
TGGACCGAGT ATTCGGACTT TCGCATCGCC GACCTTCAGG ACGCCGAACA ACCCGTCTCT
CTGTACCTGG TCACCAGTCC GGAAGACAAG AACCGGCTCA AGCCCCTCAT TCGCCTGGTG
CTCAACCAGA TTGCCTCCCA GTTTACCGCG GAAGAACGCC TGGAAGCGAA AGACGGGCGA
ATCGTCGCCA AGGGAAAGCA TCGGCTGCTC TTGCTGCTCG ACGAATTCCC GAGCCTGGGC
AAACTCGATG TGTTCCTGGA CAGCATCGCC TTCCTCGCAG GCTACAACGT CAAGCTATAT
CTCATCACGC AGGACATCGC CCAGCTGGAA GATGAAGGCC ACGGCTACGG CAAGGCCGGG
GCCAAGACCA TCATCGGCAA CTGTCACATC CGGGCGGCCT ACGCGCCCAA CCAGGTCGAG
ACGGCCAAGT GGATCTCTGA CATGCTGGGC ACCCGTACCG TGACCATGGA AAACGACAAC
CAGAGTTTTG ACGGTTCCCT GTTCGGTCAG AACAAGGGCT ATTCCACGAG CCTCAGCTAC
CAGTCCCGCC CCCTGCTGAC AGCGGATGAG GTCATGACCT TGCGGGGACC GGAAAAGGAA
GGTGCCAATA TCAAGACCCC CGGCGATATG CTGGTATTCG CGGCGGGCTT TCATCCCATC
TATGGACAGC AGCTGCTCTA TTTCAAGAAC CCGGAATGGC TCGATCGGGC ATCCATGCGG
TGGCCAGAGA AGAGCGATTC CATCCCCGGA GCCAGGAAAG ACTACAAGGC CATTCTGGGT
GAGTCGGGTG GAACGCTACC CATCCCCCAT ATCGAGAAAA AGCCGGAAGG GCAGGATCCT
GTCGAGGAGG TGAGCGAGGC TGAAAGGGCG GCATTGGCCG CGGCGGCTGG CGATCTGGAC
GCCGTGGCAG GAGAGTGCAA GCCCCTCGCG GGGTGCAAGC CCTTTGCTGA GTGCAAGCCA
CTCGCGGGGC GCAAGCCCAC GGGGGACGGG AAATATGACA CGTCCGAGCG GGACGCGGAG
AGAGGCGTTA TCGGGGGTTT GATGGGGGAT GACGGCGACG GATGA
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| Protein sequence | MVNSIHAPNS TVSDYKIQRL ARGGRLKTTL AGVAAGVLGY TLGISYVARD VFPGYQWTDD
FIQKAHAYIA LPYGWRLYDP LPFLRPMILN IHYPVIHQAF YDAGLPAVVL GILTAGILGK
KHKDAQKAVL DNPVHGSAHW AGKSDAIRAA LLPSPPPKTV MDSLRPWLGM HPAKGMHPAK
GMHPAKGLHP AKGLKGGSDW ARWQERREKR KKEAAEWRKR RAEREKKRLS EIPEPTVFDR
FDSPHVCYVG AFVENGAATP LQHTGAEHIL VFAPTRSGKG VGLVLPTLLD GWMDSVVVHD
IKGENFHLTA GYRKAMGHHI LKFSPGSVSE EGCHFNPLDA VRVGTQYEVK DVMNIATMIV
DPDGKGLNDH WQKTGFALLT SIILHVLYAM PDKTLRGVAA YLNDPTLESV DVAFERMMQT
EHDPDEQYGW RDGNGQCSRV HPVIAQSARE MLNKAENEKS GVISTMMSFL SLYRDPIVAK
WTEYSDFRIA DLQDAEQPVS LYLVTSPEDK NRLKPLIRLV LNQIASQFTA EERLEAKDGR
IVAKGKHRLL LLLDEFPSLG KLDVFLDSIA FLAGYNVKLY LITQDIAQLE DEGHGYGKAG
AKTIIGNCHI RAAYAPNQVE TAKWISDMLG TRTVTMENDN QSFDGSLFGQ NKGYSTSLSY
QSRPLLTADE VMTLRGPEKE GANIKTPGDM LVFAAGFHPI YGQQLLYFKN PEWLDRASMR
WPEKSDSIPG ARKDYKAILG ESGGTLPIPH IEKKPEGQDP VEEVSEAERA ALAAAAGDLD
AVAGECKPLA GCKPFAECKP LAGRKPTGDG KYDTSERDAE RGVIGGLMGD DGDG
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