Gene AFE_1694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1694 
Symbol 
ID7136500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand+ 
Start bp1466762 
End bp1467430 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content60% 
IMG OID643530077 
Productconjugal transfer protein 
Protein accessionYP_002426116 
Protein GI218665075 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3701] Type IV secretory pathway, TrbF components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.194664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAGCA ATCCCGATTA TCTGGCTGCC CGCCAGGAAT GGCTTGAGCG CTACGGCTCC 
TACATCGCGC AGGCGAGAAA CTGGCGCATC GCTGCCCTGT CGGCTATCGG CATTGCCGCC 
CTGTTTGGGG CGGGCATGGT GTACGAGGCA GACCGTGTCC ATATCGTGCC CTATGTCGTC 
GAAGTGGACA AACTGGGCAA GGCTGTGGAA CTGGCGCAGG CCGTGCGGGC CGGTTCTTTC 
GCCCAGCCGG TAGTGCAGCA CATCGTTTCC CGCTTCACCT GGCTCGCTTT CACGCGCAGC 
CCGGACAAGC ATGTGCAGAA GCACTTCATC GATGAATCCT ATCATTACAT CGCATCGAGC 
GCGGAATCCT CGCTGGACGC CTTCTACGCG CAGCACAATC CCTACGCGGC CTATTCCAAC 
AAGACGCAGG GCAACACGGT CACGATCCAG AGCGCCGTTC CCGTTGGGCA GGTGACGGGC 
AAGGGTGGCT CGTACATCGT CGATTTCCTG GTAAAGCACT ATGGCCCGCA TGGCGGCGTG 
GATGGCGAGC AGAACTGGCA AGGCACGGTC ACTTACGCGA CGGTCCCGCC ATCGAACAAC 
CCCAATGTCC TGAAAGGCAA TCCATTCGGC ATCTACATCA CGCACTTTGC ATTCAGTCCG 
CAGGTGTAA
 
Protein sequence
MSSNPDYLAA RQEWLERYGS YIAQARNWRI AALSAIGIAA LFGAGMVYEA DRVHIVPYVV 
EVDKLGKAVE LAQAVRAGSF AQPVVQHIVS RFTWLAFTRS PDKHVQKHFI DESYHYIASS 
AESSLDAFYA QHNPYAAYSN KTQGNTVTIQ SAVPVGQVTG KGGSYIVDFL VKHYGPHGGV 
DGEQNWQGTV TYATVPPSNN PNVLKGNPFG IYITHFAFSP QV