| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1691 |
|---|
| Symbol | rbcL |
|---|
| ID | 7134966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 1462659 |
|---|
| End bp | 1464080 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643530074 |
|---|
| Product | ribulose bisophosphate carboxylase |
|---|
| Protein accession | YP_002426113 |
|---|
| Protein GI | 218666828 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTAA AAAAGTATGA GGCCGGAGTA AAGGAATACC GGCAGACCTA TTGGGCCCCC
GAGTACGTGC CTTTGGACTC TGATATCTTA GCCTGTTTCA AAATTACGCC ACAACCAGGG
GTGGATCGTG AAGAAGCCGC CGCCGCGGTA GCCGCCGAGT CTTCTACCGG CACTTGGACC
ACGGTGTGGA CCGATTTGCT GACTGACATG GATTACTACA AAGGCCGTGC TTATCGCATC
GAAGATGTGC CGGGCGATGA CACCAGCTTT TACGCATTTA TCGCCTATCC CATAGATTTG
TTCGAAGAAG GGTCCGTGGT TAACGTATTC ACCTCTTTGG TGGGTAATGT CTTCGGCTTC
AAGGCAGTGC GTGCACTACG CCTGGAAGAT GTACGCTTCC CACTCGCCTA CGTCAAAACC
TGCAACGGAC CGCCCCACGG CATCCAGGTC GAGCGCGACA AGATGAATAA ATATGGCCGA
CCAATGCTCG GCTGCACCAT CAAGCCCAAG CTTGGTCTAT CTGCCAAGAA TTATGGTCGT
GCAGTCTACG AGTGTCTGCG CGGCGGTCTG GATTTCACCA AGGACGATGA GAACGTCAAC
TCGCAACCCT TCATGCGCTG GCGCGATCGG TTTCTGTTCG TGGCTGATGC GATCCACACG
GCCGAAGCTG AAACTGGTGA GCGCAAAGGA CACTATTTAA ATGTTACAGC ACCCTCGCCC
GAGGAAATGT ATGAGCGGGC AGAGTTCGCC AAGGAACTCA ATATGCCCAT CATCATGCAC
GACTTCCTTA CGGGTGGTTT CTGTGCCAAT ACCGGTCTGG CGCGTTGGTG CCGGAAAACC
GGCACCCTGC TACACATCCA CCGTGCCATG CATGCGGTTG TGGACCGTAA TCCGCACCAC
GGCATTCACT TTCGGGTGCT GGTCAAGGCG CTTCGTCTGT CGGGTGGTGA TCACCTGCAT
ACAGGCACGG TGGTTGGCAA ACTGGAAGGT GACCGCGCCT CCACTCAAGG GTGGGTCGAC
CTGCTACGCG AATCGTTCGT CCCTGAGGAT CGCAGTCGAG GCATCTTCTT CGACCAGGAC
TGGGGATCCA TGCCAGGTGT GTTCGCAGTA GCCTCTGGCG GTATCCACGT CTGGCACATG
CCGTCGTTGT TAGCAATCTT TGGCGATGAT GCGGTATTCC AGTTTGGTGG CGGGACGCTA
GGGCACCCAT GGGGCAACGC TGCCGGAGCA GCTGCCAATC GTGTCGCGCT AGAGGCGTGT
GTGGAAGCGC GCAATGAAGG TCGCGATCTC GAGCGCGAGG GCAAGGACAT TCTCACCAAC
GCAGCGAAAG ACAGTCCAGA GTTAAAAATT GCTCTGGAAA CCTGGAAAGA GATCAAGTTT
GAATTTGATA CCGTGGACAA ATTGGACGTG GTAAATCGCT GA
|
|---|
| Protein sequence | MAVKKYEAGV KEYRQTYWAP EYVPLDSDIL ACFKITPQPG VDREEAAAAV AAESSTGTWT
TVWTDLLTDM DYYKGRAYRI EDVPGDDTSF YAFIAYPIDL FEEGSVVNVF TSLVGNVFGF
KAVRALRLED VRFPLAYVKT CNGPPHGIQV ERDKMNKYGR PMLGCTIKPK LGLSAKNYGR
AVYECLRGGL DFTKDDENVN SQPFMRWRDR FLFVADAIHT AEAETGERKG HYLNVTAPSP
EEMYERAEFA KELNMPIIMH DFLTGGFCAN TGLARWCRKT GTLLHIHRAM HAVVDRNPHH
GIHFRVLVKA LRLSGGDHLH TGTVVGKLEG DRASTQGWVD LLRESFVPED RSRGIFFDQD
WGSMPGVFAV ASGGIHVWHM PSLLAIFGDD AVFQFGGGTL GHPWGNAAGA AANRVALEAC
VEARNEGRDL EREGKDILTN AAKDSPELKI ALETWKEIKF EFDTVDKLDV VNR
|
|---|
| |