| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1684 |
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| Symbol | cscD |
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| ID | 7137282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 1457016 |
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| End bp | 1457318 |
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| Gene Length | 303 bp |
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| Protein Length | 100 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643530067 |
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| Product | carboxysome shell peptide |
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| Protein accession | YP_002426106 |
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| Protein GI | 218666355 |
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| COG category | [C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0610381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATGG CAAACGTCAG CGGAGTGGCA CTGGGTATGA TCGAGACGCG CGGCCTGGTG
CCAGCGATTG AAGCGGCAGA CGCGATGACC AAGGCGGCGG AAGTGCGTCT GGTGGGCCGC
CAGTTCGTGG GCGGTGGGTA TGTCACCGTA CTGGTGCGCG GTGAGACCGG TGCGGTAAAT
GCGGCGGTAC GCGCCGGAGC AGATGCGTGT GAGCGTGTCG GTGACGGACT GGTAGCCGCC
CATATCATCG CCCGCGTACA CAGTGAAGTG GAGAATATTC TGCCCAGCAG CCCGGTGGAA
TGA
|
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| Protein sequence | MKMANVSGVA LGMIETRGLV PAIEAADAMT KAAEVRLVGR QFVGGGYVTV LVRGETGAVN
AAVRAGADAC ERVGDGLVAA HIIARVHSEV ENILPSSPVE
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