| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1683 |
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| Symbol | cscE |
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| ID | 7137305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 1456632 |
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| End bp | 1456970 |
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| Gene Length | 339 bp |
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| Protein Length | 112 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643530066 |
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| Product | carboxysome shell peptide |
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| Protein accession | YP_002426105 |
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| Protein GI | 218666785 |
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| COG category | [C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.373595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAATG TCAGCGGAGT GGCACTGGGT ATGATCGAGA CGCGCGGCCT GGTGCCGGCG
ATTGAGGCGG CGGACGCGAT GACCAAGGCG GCAGAAGTGC GCCTGGTGGG CCGCCAGTTC
GTGGGCGGCG GCTATGTCAC CGTGCTGGTG CGCGGTGAGA CTGGTGCGGT GAATGCGGCG
GTACGGGCAG GGGCGGATGC GTGTGAGCGT GTTGGCGACG GACTGGTGGC CGCCCATATC
ATCGCCCGCG TGCACTCAGA GGTAGAAAAC ATACTACCGA AGACGCCCGA TGCCGGTGAC
AGCGGCCTGG ATGGCGTGGT CAGGCAGTCA CTCAGCTAG
|
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| Protein sequence | MINVSGVALG MIETRGLVPA IEAADAMTKA AEVRLVGRQF VGGGYVTVLV RGETGAVNAA
VRAGADACER VGDGLVAAHI IARVHSEVEN ILPKTPDAGD SGLDGVVRQS LS
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