| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1676 |
|---|
| Symbol | |
|---|
| ID | 7135328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 1450475 |
|---|
| End bp | 1451656 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643530059 |
|---|
| Product | fructose-bisphosphate aldolase class II family protein |
|---|
| Protein accession | YP_002426098 |
|---|
| Protein GI | 218667491 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0191] Fructose/tagatose bisphosphate aldolase |
|---|
| TIGRFAM ID | [TIGR00167] ketose-bisphosphate aldolases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTTGG TGCACATGAA AGATCTTCTG AACCATGCCT ATGCGCACGG ATACGCGGTA
GGTGCTTTCG ACGTCGTGAA TCTGGAGTTC GTGGAGGGCG TCATGGCCGC TGCCGAGCGG
TCTCGCGCAC CCGTAATCCT CTCTCTAGCT GAGTCGCAAC TGGAACACTA TGACTTCGAA
CTGCTGATGT CAGGGGTAGA GGCAGCGGCA CGCCGTAGCT CGGTACCCGT GGCCCTTCAT
CTTGACCGTG GGGCAAACCT GGAAGCGGCG GTGCGGGCCA TCCGCCTGGG CTGCAACAGC
GTGATGATGG ACGCCTCCCA GTCGACTTTT TCCGATAACC TGGCGCATAC GAAGACTGTA
GTCGAGATGG CCCATGCCTG CGGGGTGCCT GTCGAAGGGA GCTTGAGTTA TCTCACTGAT
GCAATGGATA TAAACGCCCA ATGGCATACC GCCGCGTTAC CTTCCACCAC AGTGGCCGAG
GCAAAAGGCT TTGTCGAACG CACGGGAGTA GACTTCCTCG AGGTGTCCAT TCGGGTGGAA
CAGAGTTGTC CAAACAGTAA AGCCAAGCTG GATATCCAAC GGCTTCGCAG CATCAACCAG
GCGCTTGGTA TTCCGCTGTC AATCCACTGC AGGGTCCGGC TCGACGATGA CCAATTTCGG
CGACTCATTG TCCACGGCGT GGCCAAGATC AACTGTTTTA CAGCGTTGGC TGAAGCTGCG
AATGCGGCGA TCCGCGCACG GGCAAGGTCA GCGCCGGGTG CTGGTTACCT GGATTTGGTT
CAGAGCGTTG GTGCGGCAAT CAGTGCTAAG GCTGAACGAT GTATGCGCGT GTTGGGTGCT
GCCGGGCGGG CTGCTGAGGT ATTGGCATGC TGTCGTCCGT GGGCACCCGT GGAACACCTG
ATCATCCACA ATGTTATTGG CATTTCTGAA AAGGAAGTGG CTGCGATGAT GAGTGAGGGG
CAGCAAGCGC TGAGCACCAT TCCTGGAGTG CGGTCAGTGA TTACGGGTAA GGCGATGAAA
GAACACGCTC AATACCGCTA CTGCTGGCGG GTACGTTTTG CGGCACCGGA AGTGATTGAT
TCCTACCACA GGCATCCTGA CTATACAGCC TTCACCAACC GGCGTTTCCT ACCTGTGGCC
GACAGAGAAA TCAGCATCGA CTACGCCATG GAAAGCTTAT GA
|
|---|
| Protein sequence | MPLVHMKDLL NHAYAHGYAV GAFDVVNLEF VEGVMAAAER SRAPVILSLA ESQLEHYDFE
LLMSGVEAAA RRSSVPVALH LDRGANLEAA VRAIRLGCNS VMMDASQSTF SDNLAHTKTV
VEMAHACGVP VEGSLSYLTD AMDINAQWHT AALPSTTVAE AKGFVERTGV DFLEVSIRVE
QSCPNSKAKL DIQRLRSINQ ALGIPLSIHC RVRLDDDQFR RLIVHGVAKI NCFTALAEAA
NAAIRARARS APGAGYLDLV QSVGAAISAK AERCMRVLGA AGRAAEVLAC CRPWAPVEHL
IIHNVIGISE KEVAAMMSEG QQALSTIPGV RSVITGKAMK EHAQYRYCWR VRFAAPEVID
SYHRHPDYTA FTNRRFLPVA DREISIDYAM ESL
|
|---|
| |