| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1673 |
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| Symbol | ilvD-1 |
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| ID | 7134615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1446832 |
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| End bp | 1448505 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643530056 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_002426095 |
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| Protein GI | 218666802 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.379644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGACA ACCGCAGAAG CAAGACCATC ACGCAGGGCG TGCAGCGCTC GCCCAACCGG
GCCCTGCTGC GTGCGGTGGG GTTTGGTGAT TGGGACTTCG ACAAGCCTAT CGTCGGCGTG
GCGAACGCGC ACAGCAGCAT CACGCCTTGC AATATCGGTA TCGGCGTGCT TGCCGCCCGT
GCGGAAGCGG CGCTCAAATC GGCTGGTGCC ATGCCGCAAA CGTTTGGCAC CATCACCATT
TCCGATGGTA TTTCGATGGG TACCGCCGGC ATGAAATATT CGCTGGTGTC ACGCGAAGTG
ATTGCCGACT CCATTGAAAC GGTGTGTCAG GGCCAGAGCA TGGACGGCGT GCTCGCCCTC
GGCGGCTGCG ATAAGAACAT GCCGGGCGCA ATGATCGCCA TCGCCCGCAT GAACATTCCG
GCCATTTTCG TTTATGGCGG CACCATCAAG CCGGGCCACT ACCGGGGCCA AGATCTGACC
ATCATGAGCG CCTTTGAGGC GGTGGGGCAA CACACCGTCC ATAAAATTGA CGACGAAGAA
CTGCTGGAAA TCGAGCGTCG CGCCTGCCCT GGCGCGGGCT CCTGCGGCGG CATGTATACC
GCCAACACCA TGTCTTCCAT CTTCGAAGCC ATGGGCATGA GCTTGCCGTA CTCCTCCACC
ATGGCGGCGG AGGATGCAGA AAAGGCGGAG AGTGCGGCAC AGTCCGCAGA GGTATTGGTA
AGCGCCATCC GAAAACAAAT CCTGCCGCGC CAGATATTGA CGCGGCAGGC GTTTGAAAAC
GCCATTGCGG TGGCCATGGC CGTGGGCGGC TCCACCAACG CGGTATTACA CCTGTTGGCC
ATTGCGCATG CGGCACAGGT ACCACTCACC CTTGATGATT TCGAGGCCAT GCGCGAGCGT
GTGCCGGTAC TCTGCGACCT GAAACCATCG GGCCGTTACG TCTCTACCGA TCTGCATCGG
GCGGGCGGCA TTCCCCAGGT GATGAAAATA TTGCTCGCCC ACGGCGTGTT ACACGGCGAT
GCGCTGACCA TCAGCGGTCA GACGCTTGCG GAAGTTTTAC AGGATGTGCC GAGCGAAGCG
CGTACGGATC AGGAGGTGAT ACGTCCGTGG AATAATCCCA TTTATGCCCA AGGGCACCTT
GCCATCCTGA AGGGCAATCT TGCGCCCGAG GGCGCGGTGG CGAAAACCAC CGGCTTCATG
GCGCACAAAA TCACCGGTCC GGCACGGGTT TTTGAATCCG AGGAGTCGTG CATGGAAGCG
ATCCTGGCGC AGAAAATCAA GCCCGGCGAT GTCGTGGTCA TCCGCTACGA AGGGCCCAAG
GGCGGACCCG GTATGCGCGA AATGTTATCC CCCACCTCGG CGATCATCGG CGAAGGATTG
GGCGATTCGG TTGGCCTTAT TACTGACGGC CGCTTTTCCG GCGCCACATA CGGCATGGTA
GTCGGTCATG TCGCGCCGGA AGCCGCAGTG GGGGGCACGA TCGCACTAGT CATCGAGGGA
GACTCGGTGA CTATAGACGC CGGACAGCGT TTGCTGCAAC TCAACGTGTC TGATGAAGAA
ATCGGACGCC GCCGCGCCGT CTGGCAAGCA CCCGCACCGC GCCACACGCG CGGCGTTTTG
GCGAAGTACG CCAAATTGGT TTCCTCGGCC AGTAAGGGGG CCGTAACAGA TTGA
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| Protein sequence | MSDNRRSKTI TQGVQRSPNR ALLRAVGFGD WDFDKPIVGV ANAHSSITPC NIGIGVLAAR
AEAALKSAGA MPQTFGTITI SDGISMGTAG MKYSLVSREV IADSIETVCQ GQSMDGVLAL
GGCDKNMPGA MIAIARMNIP AIFVYGGTIK PGHYRGQDLT IMSAFEAVGQ HTVHKIDDEE
LLEIERRACP GAGSCGGMYT ANTMSSIFEA MGMSLPYSST MAAEDAEKAE SAAQSAEVLV
SAIRKQILPR QILTRQAFEN AIAVAMAVGG STNAVLHLLA IAHAAQVPLT LDDFEAMRER
VPVLCDLKPS GRYVSTDLHR AGGIPQVMKI LLAHGVLHGD ALTISGQTLA EVLQDVPSEA
RTDQEVIRPW NNPIYAQGHL AILKGNLAPE GAVAKTTGFM AHKITGPARV FESEESCMEA
ILAQKIKPGD VVVIRYEGPK GGPGMREMLS PTSAIIGEGL GDSVGLITDG RFSGATYGMV
VGHVAPEAAV GGTIALVIEG DSVTIDAGQR LLQLNVSDEE IGRRRAVWQA PAPRHTRGVL
AKYAKLVSSA SKGAVTD
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