Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1668 |
Symbol | |
ID | 7136348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 1442735 |
End bp | 1443514 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643530051 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_002426090 |
Protein GI | 218667979 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.145248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAACAT CTACCACCGA TAAAAACTCC TCCATCCAGG TGATCGCCCG GTTGCGTGCT CTGCTGGATG CCCTCGCGGC GGAAGGGGGG AGCGCACCAC TCAAAATACT CGCCGCCGTC ACCGGACTCG CACCCTCCAC CGCCTTCCGC ATTCTGGCCT CAGCACAGGA CAACCAACTG ATCGCTCGCG ATGCTGGCGG CCATTACCGC TTCGGCCAGC GCTTGCAAGA CTGGGCGCAG CTCGCCCATG GCCGCAGCGA CCTACGCGCC GTCGCCCGGC CCATCATGGC CTGGCTGCGC GATCAGGTGC AGGAGACGGT GAATCTTACC ATCCAGGAGG GCGACGAAGT GATCTATGTA GAGCGCGCCA CCTCGTCGCG GATGATGCGG GTGGAGCAGG TGATCGGCAG TCGCGCGCCG CTACATACCA CCGCCGTCGG CAAGCTCATG CTGGCGCTGA ATGGCGAAGC TGCTGTCCAA AGTTACGCTA CCCGCACCGG CTTGCCGGCG CTTACTGTTC ATACCCTGCG TCAGGCCGAT GCCCTCTGGG AAAACGCCAG AAGCGGACTT GAACGTGGCT ATGCACTGGA CAATGAGGAA GCCGAGATTG GCGTCGGTTG TCTCGGCGTG CTGCTCCACA GCCGATTGCC CTGGAATGCC GGCCTCAGTA TCTCCGCGCC TATTGAGCGT CTCCAGGAAA GCTGGGTACC GATGCTACAG GAGGCTGCGC GGCGGATAGA TAGGGGCCAC CAGAAAAATG ATGTACCGTC CATAAGTTGA
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Protein sequence | MSTSTTDKNS SIQVIARLRA LLDALAAEGG SAPLKILAAV TGLAPSTAFR ILASAQDNQL IARDAGGHYR FGQRLQDWAQ LAHGRSDLRA VARPIMAWLR DQVQETVNLT IQEGDEVIYV ERATSSRMMR VEQVIGSRAP LHTTAVGKLM LALNGEAAVQ SYATRTGLPA LTVHTLRQAD ALWENARSGL ERGYALDNEE AEIGVGCLGV LLHSRLPWNA GLSISAPIER LQESWVPMLQ EAARRIDRGH QKNDVPSIS
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