| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1665 |
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| Symbol | glcD |
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| ID | 7135121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 1437587 |
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| End bp | 1439053 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643530048 |
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| Product | glycolate oxidase, subunit GlcD |
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| Protein accession | YP_002426087 |
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| Protein GI | 218665271 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.121595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCGT CCCCCTACCC TACCGCTCTC CTTGCGGAAT TGCAGGCGGC CTTGTCCGCG
GATGCGGTCT TGCATGGTGC GGAAGATTTA CGGCCATATG AATGCGACGG CCTCGCGGCA
GTGCGCGAGT TGCCGCTTTG TGTGGCATTG CCCACGGACC GGGAGGGCGT ACAGGCGGTC
TTGCAAATCT GTCAGCGCCA CGGCGTGGCG GTGGTGCCGC GTGGCGCGGG TACGGGCCTT
TCCGGGGGCG CGCGCCCGCT CCGTGATGCG GTGCTTCTCA GTCTGGCCCG CTTACGTCAT
ATTGTCGCCA TCGACCGGGA AAACCGAACC GCTCGGGTTC AGCCGGGCGT GCGCAATCTG
GCCATCAGCG AAGCGGCCCG CCCTTTGGGT TTGTATTACG CGCCCGATCC CTCCTCGCAG
ATCGCCTGCA GTATTGGCGG CAATGTAGCG GAGAACTCCG GCGGTGTGCA TTGCCTGAAA
TACGGGCTTA CCGTCCACAA CATTCTGGAG CTGGATGTGC TGACCGCCAC GGGTGAAACC
CTGCGGATCG GCAGTCAGGC TCTCGACAGC CCCGGCTACG ATCTGCTGGC GCTAATGACC
GGTTCCGAAG GATTGCTGGG TGTGGTGACG GAATGCACGG TGCGTTTGTT GCCGATGCCG
GAGCATGTCC TCGTCCTGCT GGCGGCCTTT TCCAGCGTCG AGGCGGCAGC GGAGTCGGTC
AGCGCCATCA TTGCCTCGGG CATCATTCCC GCCGGCCTGG AGATGATGGA TCGGCTCGCC
ATCGAAGCAG CGGAGGATTT TGTCCATGCC GGTTATCCCC GCGATGCCGC AGCCATCCTC
CTTTGTGAGT TGGATGGCCC GGCCGTGGAA CTGGAGGAAC AGCTACGAGA GGTCGAAACC
CTGCTCCAAC GCCACGGTGC CCGCGCTATC CGCATAGCCG AGGACGCAGC AACCCGTCTG
CTGCTTTGGA AAGGCCGCAA GGCGGCCTTT CCGGCGGTGG GGCGTCTGGC TCCGGATTAT
TACTGCATGG ACGGGACCAT TCCGCGCCAG CGCCTGGCGG AAGTGCTGGA GCGAATCACC
GCCTGGTCCG CCGAATATGG ATTGCGGGTC GCCAATGTCT TCCACGCGGG CGATGGTAAT
CTGCACCCGC TGATCCTTTA CGACGCGAAT GCCGAGGGAC AGCTGCACAC CGCTGAGGAA
TTTGGGCGCC GCATCCTTGA ACTCTGCGTG TCCGTCGGTG GCAGCGTCAC CGGCGAACAC
GGCGTCGGCG TCGAGAAACT GGACAGCATG TGCGTTCAGT TCAACGCCGC CGAACTGGCG
CAGTTGCATC GCATCAAACA CGCCTTCGAC CCCGAAGGTC GCCTCAACCC CGGAAAGGCC
GTACCCAGCC TGCATCGCTG CGCCGAGTTG GGGGCCATGC ATGTGCATCA TGGCCAGTTG
CCTTTCCCCG AACTGGAGCG TTTTTGA
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| Protein sequence | MPASPYPTAL LAELQAALSA DAVLHGAEDL RPYECDGLAA VRELPLCVAL PTDREGVQAV
LQICQRHGVA VVPRGAGTGL SGGARPLRDA VLLSLARLRH IVAIDRENRT ARVQPGVRNL
AISEAARPLG LYYAPDPSSQ IACSIGGNVA ENSGGVHCLK YGLTVHNILE LDVLTATGET
LRIGSQALDS PGYDLLALMT GSEGLLGVVT ECTVRLLPMP EHVLVLLAAF SSVEAAAESV
SAIIASGIIP AGLEMMDRLA IEAAEDFVHA GYPRDAAAIL LCELDGPAVE LEEQLREVET
LLQRHGARAI RIAEDAATRL LLWKGRKAAF PAVGRLAPDY YCMDGTIPRQ RLAEVLERIT
AWSAEYGLRV ANVFHAGDGN LHPLILYDAN AEGQLHTAEE FGRRILELCV SVGGSVTGEH
GVGVEKLDSM CVQFNAAELA QLHRIKHAFD PEGRLNPGKA VPSLHRCAEL GAMHVHHGQL
PFPELERF
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