| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1640 |
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| Symbol | |
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| ID | 7136509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1412420 |
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| End bp | 1413160 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643530023 |
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| Product | conjugal transfer protein trbJ, putative |
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| Protein accession | YP_002426062 |
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| Protein GI | 218668165 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.894156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATCC AAAGCAAGGC AGTCATGCTG AGCGTGAGCC TCGCTCTATT GCCGGCGCCC
GCCTTTGCCG TCAGTGAAGT GGCCGGTGCC ACTTTTCCTG AACAGATCGT CCAGGAAGCG
ACGTCTGTTC AGCAGTTGGC GAAGCAGGCG CAGGAAGTGA CGACACAGAT CAGCATGTAC
GCCAACGATA TTGAGCGCTA TCAGAACATG GTGGCCAACA CCCTGAACAT GCCGGCGGCC
ATGTACGCCC AGATCTGGAA TCCGCTGGTG GGATCCATTC AGAAACTGAC CAGCATTTAT
AGCCAGGCAC AGGCGCTGGG CTACGCCGGG CAGAATATCG GCGCTGAACT CGCGCAGGAG
TATCAGGGGG CTGGCAGCTC CATCCAGAAT CTGTCCTCCG TCTATGCCAA CTGGAACCAG
ACGACCAACA CCGACATGGA AGACGCGCTG GAGTCCCAGC ACCTGGCGGC GCAGAACTTC
GCGACACAGG ATGCATCCAT GCAGACGATC CAGAATGAAG CGCAGACAGC TCAAGGCCGG
GAGCAGGTGG CCGCTGCCGC CGTGGCTGCG GCCAACGTCA CCACCAAGTC GATCCAGCAA
CTGGAGCAGA TCACCATGGC TGGCAAGGAC GCGCAGATCG CTTATCTGAA GCAGAAGAAG
GCGGAAAAGA ACGTGACTGC GCAAGAAGCT GCAGACGGAC TCTTTTCCGG TGGCACGAAC
AACCCCAGCC TTTTGCCTTG A
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| Protein sequence | MSIQSKAVML SVSLALLPAP AFAVSEVAGA TFPEQIVQEA TSVQQLAKQA QEVTTQISMY
ANDIERYQNM VANTLNMPAA MYAQIWNPLV GSIQKLTSIY SQAQALGYAG QNIGAELAQE
YQGAGSSIQN LSSVYANWNQ TTNTDMEDAL ESQHLAAQNF ATQDASMQTI QNEAQTAQGR
EQVAAAAVAA ANVTTKSIQQ LEQITMAGKD AQIAYLKQKK AEKNVTAQEA ADGLFSGGTN
NPSLLP
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