| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1638 |
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| Symbol | |
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| ID | 7135676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1409555 |
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| End bp | 1412077 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643530021 |
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| Product | conjugal transfer protein trbE, putative |
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| Protein accession | YP_002426060 |
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| Protein GI | 218666854 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTCCC TGAAACAGTA CCGCGATCAG GCCCTGGGTC TTCCCGATCT GTTGAACATC
GCTTTTCTGG TGGATGGCTG GCAGACGGAT GCCGGGGAAA TGGCCATCGC GCTGCAAAAA
GACGGGAGCT TTCTGGCGGG GTTCCGCTAT GACGGGCCTG ATCTCGAAAG CCAGTCCACG
CAGGATCTGG AGGCGCTCTC GGCCACCTGG AATAACGCCA TCGCCCGGCT GGGCACGGAC
TGGGGCGTGC ATGTCACGGC GATTCGCGAG CCGGCCGACG GCTATATCGA CGAATCGGAG
TGCGCCTTTC GCGACCCGGT GTCGCGCCTC ATCGAGGCCG AGAGGCGGGC GCAGTTTGGA
TCGGAAACCC ATCACTATGT CAGCCGCTAT TACCTTACAG TTGCCTGGCG AACGCCCATT
GATGCGGAAG TGCAGTTGGT ACAGTCCATG ATCCAAAAGA AAGCCGGTAA ACAACCCGGG
CAGCTGGCCG ATGCGGCATT CCGGGACACG CTGGCCCGCT ACCGGCAGGT GATTGAAGTT
ATCCTGGGCA TTTTCAGGCA CGGATACCGG GTGAAGGCCA TGGATGCCGA CGCCCTGCTG
ACCCATATCC ATGAGTGCCT GACCGGCGCC ACGCATCGCG TCAATGCGCC CCGGATTCCG
GCGTATCTGG ATGCCCTCAT CGGGCACCAT GATTTTGTGG GCGGTCTGGA GCCGTCCATG
GACGGGGAAG AGATTCGCGT CGTAACGGTT CTGGGCTATC CCAGCATGAC CTTCCCCGAG
ATGCTGGAGA ACCTGCATAG CCTGCCCATT CCCCTACGCT ACACGCTCCG CTTCCTGCCC
CTTGATCCGC CGGATGCGGT GGCGGACATG GCGAAGATCC GGGATCGCTG GTTTGGCTCC
CGGGCCAACA TGAAATCCCT GCTTACGGAG AAGATGACGG GCGAAGCCCA GGGACAGTTG
TCCGCCGACG ATACGGTGGT GAACCTCGCC TATGACGCCA AGCAGGCCGT CAATGAGGCG
CGGGAGGGCG CTGTGAAGTT TGGCAACTTC ACGCTATCCG TCGTGCTGCG TTCCGCCGAT
GAAAAAGTGC TCGCGGACCG GATCAAGGCG ATCAAGACCT TCTTCGACAA TGCCGGCTAT
GTCGCCCACC TGGAAACGAC CAATACGGTA GAAGCGTTCC TGGGCAGCAT CCCGGGTCAT
CTCTATGAGA ACATCCGCCG GCCACTGATG CACTCGCTGA ATGTTGCGGA TTTCGCGCCC
AAGACGGAAA TCTGGGCCGG TGAAGCGCGT TGCCCGAGTC CGCTGATGAA TCTGTCTGAC
GGCCGCAAAG CTCCGCCCCT GCTGTACGCG GCGACCACGG GAAATACGCC CTTCCGACTG
AATCTCCATG TCGGCGATCT GGGGCACAGC CTGATTGCCG GCATGACCGG GGGCGGAAAG
AGTACGCTCC TGGCCCTGTT GGCCGCGCAA TGGCAACGTT ATCCCGACAG CCGGGTGATT
GCCTTCGACA AGGGCATGAG TCTCTACGCC CTCACGGAAG CCATGGGTGG GCAGCATTAT
GATCTGAACG GCCCGACCTC CGATCTGTTT TTTGCACCCC TGCAGCACGT CGATGATCCG
GCCGAGGCGG CTTTTGCGGC CGACTGGGTG GAAGCGTTGG CCACCTTGCA GGGCATGACG
ATCACCTCTA CGGAGCGTTC GGCCATTCGT GACGCTGTGC ATGGCCTGGC CCGGGAATCC
GGGCGCTCGC TCACGGCGCT GGTCCAGATG ATCCAGAACC GGGGGATCAA GGATGCCTTG
CAGTATTACA CCCTGACCGG GCAAACGGGG AAGCTGCTTG ATGCCGAGAG TGACGGGCTG
TCGATGGCCG ATGCCAGCAT GATCACTTTC GAGATGAGTC ACCTGATGAA CGGCGGCCCG
GCGGAGCACC GGGTAACGGT TCCGGTACTG CTGTATCTGT TCCACCGGAT CGAACAGATG
CTGGATGGAC GGCCCACCCT CATTTTGCTC GATGAGGCCT GGACCTTCCT GGACAACGAG
CTGTTTCTGG CGAAGTTGCG GCAATGGCTG AAGGAACTGC GGAAGAAGAA TGCCGCCGTC
GTTTTTGCCA CACAGTCCCT GAATGATCTC AAGAACAGCC CCTTGCTCCC GGTCCTGAAG
GAGTCCTGCC CGACGAAAAT CTTCCTGCCC AACCGGGCTG CCACCAGTCC GGATCTCAGA
CCCCTGTATA TCGACATGGG GCTGAATGAT CGGCAAATCG ATCTGGTGGC GGCGTCCACG
CCGAAGCAGG ACTACTACCT GTCCACACCC GAATGTCAGC GCCGGATTCA GTTTGGCATG
GGGCCGGTCA CCCTGGCTTT TTGCGGTGTC TCCGATCCAC GTGAGGTCAA GCGGGTAGTG
GAGCTCAAGA CGCAGCACGG CGATCGATGG CCGATCGCCT GGCTGAAAGA GCGGCTGTCA
CCCAGCATCC GGGATGGCTG GGTGAGCTAT GCGGAGTCCC TTTACCAGGG AGAACGGGCA
TGA
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| Protein sequence | MRSLKQYRDQ ALGLPDLLNI AFLVDGWQTD AGEMAIALQK DGSFLAGFRY DGPDLESQST
QDLEALSATW NNAIARLGTD WGVHVTAIRE PADGYIDESE CAFRDPVSRL IEAERRAQFG
SETHHYVSRY YLTVAWRTPI DAEVQLVQSM IQKKAGKQPG QLADAAFRDT LARYRQVIEV
ILGIFRHGYR VKAMDADALL THIHECLTGA THRVNAPRIP AYLDALIGHH DFVGGLEPSM
DGEEIRVVTV LGYPSMTFPE MLENLHSLPI PLRYTLRFLP LDPPDAVADM AKIRDRWFGS
RANMKSLLTE KMTGEAQGQL SADDTVVNLA YDAKQAVNEA REGAVKFGNF TLSVVLRSAD
EKVLADRIKA IKTFFDNAGY VAHLETTNTV EAFLGSIPGH LYENIRRPLM HSLNVADFAP
KTEIWAGEAR CPSPLMNLSD GRKAPPLLYA ATTGNTPFRL NLHVGDLGHS LIAGMTGGGK
STLLALLAAQ WQRYPDSRVI AFDKGMSLYA LTEAMGGQHY DLNGPTSDLF FAPLQHVDDP
AEAAFAADWV EALATLQGMT ITSTERSAIR DAVHGLARES GRSLTALVQM IQNRGIKDAL
QYYTLTGQTG KLLDAESDGL SMADASMITF EMSHLMNGGP AEHRVTVPVL LYLFHRIEQM
LDGRPTLILL DEAWTFLDNE LFLAKLRQWL KELRKKNAAV VFATQSLNDL KNSPLLPVLK
ESCPTKIFLP NRAATSPDLR PLYIDMGLND RQIDLVAAST PKQDYYLSTP ECQRRIQFGM
GPVTLAFCGV SDPREVKRVV ELKTQHGDRW PIAWLKERLS PSIRDGWVSY AESLYQGERA
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