| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1634 |
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| Symbol | trbB |
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| ID | 7136743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1406427 |
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| End bp | 1407395 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643530017 |
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| Product | P-type conjugative transfer protein TrbB |
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| Protein accession | YP_002426056 |
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| Protein GI | 218668066 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0899884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACATCC ACGCGCACGA TCAGCAGGAA CAGCAGGCCC ATGCCCGCCG GATCGAGCAG
ATGCGGCGCA TTCTGGGGCT GGAGATCGCC GCCCTGTTCG ATGACACTGG CGTCGTCGAG
ATTATGGCCA ACCCCGACGG ACGGGTCTTC GTCGAGCGTC TGGGGTCGGG AATATCCCCC
CTGGGCGAGA TCGATGCGAG CCGAGTCCAG TCCCTGCTGG GGCTCATGGC TGACTACCTG
CATACCACGG TGAGCCGTGA CCGGCCCATC GTCGAGGGGG CCATGCCCAT CGAGTTCCTG
CGCAGCCGCT TTGCCGGCGC GATTCCGCCC CTGGTGGAGG GCGCGTCTTT CAGTATCCGC
CTGCCGGCCC GTTCGGTGTA CACCCTCGAT CAGTACGTTG AGGCGGGCAT CATCACGGCG
GCGCAGATGG ACACCCTCTC CGATGCCGTG CTTTCCCGCA AGAATATCCT GGTGAGCGGT
GGCACAGGAT CCGGCAAGAC CACCCTGGCC AACGCCCTCA TCGACAGGAT CTCCAAACTA
TCCGATATCG GCACCCGCAT CGTGATTATC GAAGATACCC GGGAGCTCCA ATGCACCGCT
CCCAATGTGA TCCAGTTCCT GACCGACGAT GATGCGGGCA TCGACATGAC GCGCCTCTTA
AAGCTCACGT TGCGCTATCG GCCCGACCGC ATACTGGTGG GCGAGGTCCG CGACAAGGCG
GCCCTGGCGC TGCTCAAAGC CTGGAATACG GGACATCCGG GCGGCATCGC CACCCTGCAC
GCCAACAACC CCGAAGCGGC CTTGTTGCGT TTGGACCAGC TCTGCCAGGA AGCGGGTGTT
CCCGCGCAGC AGACGCTGAT CCATGAGGCG GTGGATATCG TTTTGCAGAT TGCCCGTGAC
CCGAATCATC CTGCTGGTCG CAGGATTTCG GCCATCCTCA ATGTGAAAGA CGGCGTGCTG
ATCTCGTGA
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| Protein sequence | MNIHAHDQQE QQAHARRIEQ MRRILGLEIA ALFDDTGVVE IMANPDGRVF VERLGSGISP
LGEIDASRVQ SLLGLMADYL HTTVSRDRPI VEGAMPIEFL RSRFAGAIPP LVEGASFSIR
LPARSVYTLD QYVEAGIITA AQMDTLSDAV LSRKNILVSG GTGSGKTTLA NALIDRISKL
SDIGTRIVII EDTRELQCTA PNVIQFLTDD DAGIDMTRLL KLTLRYRPDR ILVGEVRDKA
ALALLKAWNT GHPGGIATLH ANNPEAALLR LDQLCQEAGV PAQQTLIHEA VDIVLQIARD
PNHPAGRRIS AILNVKDGVL IS
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