Gene AFE_1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1604 
Symbol 
ID7135575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1383227 
End bp1384360 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content63% 
IMG OID643529989 
ProductABC transporter, permease protein, putative 
Protein accessionYP_002426028 
Protein GI218666993 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.168111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATATTC AGCGCCTACT GGCCATGGCT TACAAGGAGA CGCTGCAAGT CTGGCGGGAT 
CCGCGCAGCC TGGCCGTCGC GCTGCTGATG CCGCTGATGC AAATGGGCCT GCTCGGCTAC
GGCGTGAGTC TCGACATCAA GCACGTGCCC CTGTGCGTCT ACGACCAGGA GAACAGCCAG
GCCAGCCGCG CGGTAGTCGA CGATTTCACG GCTTCGAACT GGTTCACCAT CAGCCATACC
ATCGCCTCCG AGGCCGGCAT CCGCCGGGCA ATGGACCGCG GTGAATGCGC CGCAGCGGTC
GTCATCCCGG TGGACTTCTC CCGCACCCTC GCCGCGACCG GAAGTGCGCC GGTGCAAGCC
ATCTTCGACG CCACCGACGT CAATACCACC AACATAGCGA TGGGCTATGC CCAGGGTGTG
GTCGCCCAAG CCAATGCCAC GATTGCTGCC CGATGGGCCG CCAGCCATGG CGTTCAGCCG
TCGCTGGTCG GACAGGTCGA TTTCGAACCC AGCGTCTGGT TCAATGAAAC CCTGGAAAGC
CGCAACTTCA TCATCCCTGG GGTAGTCGCG GTGATCCTTG CGCTGGTCGG CGCCCAGCTC
ACCTCGCTGA CCATCTCGCG CGAGTGGGAG CGGGGAACCA TGGAGCAACT GATCTCAACC
CCGGTCACTC CGCTCGAGGT CATGTTCGGC AAGCTTATAC CGTACTTCGC CATCGGTTTG
CTCGATGCGG CGTTCTGCCT GGCCGTCGCA GTCTTCTGGT TCCACGTCCC GTTCCGCGGA
AGCATCGGCA TACTGTTCGT GACGACCGCC CTCTTCGACC TTGTCGTGCT GGGGATCGGC
TACCTCATCT CCGTGCGCAT CCGCAACCAA CTCGGGGCGA GCCAGGTCGC CCTTTTGCTG
ACCATGCTGC CTACCACCCT CCTGTCAGGC TACACCTTCC CCATCGACCA GATGCCGGCT
GCGATCCAGG TCCTCACATA TGCCGTCTAT TCGCGATACT ACGTTACCAT TCTGCGCGCG
ATCTTCCTCA AGGGTAGCGG GCTGACCGAT CTGTGGACGC CAGTCCTCGG CCTCGTCGCC
TATGCCGCGA TCATCATCTG GCTCGCCGCC AGAGCCTTCC GCAAGCATCT GTAG
 
Protein sequence
MNIQRLLAMA YKETLQVWRD PRSLAVALLM PLMQMGLLGY GVSLDIKHVP LCVYDQENSQ 
ASRAVVDDFT ASNWFTISHT IASEAGIRRA MDRGECAAAV VIPVDFSRTL AATGSAPVQA
IFDATDVNTT NIAMGYAQGV VAQANATIAA RWAASHGVQP SLVGQVDFEP SVWFNETLES
RNFIIPGVVA VILALVGAQL TSLTISREWE RGTMEQLIST PVTPLEVMFG KLIPYFAIGL
LDAAFCLAVA VFWFHVPFRG SIGILFVTTA LFDLVVLGIG YLISVRIRNQ LGASQVALLL
TMLPTTLLSG YTFPIDQMPA AIQVLTYAVY SRYYVTILRA IFLKGSGLTD LWTPVLGLVA
YAAIIIWLAA RAFRKHL