Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1604 |
Symbol | |
ID | 7135575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1383227 |
End bp | 1384360 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643529989 |
Product | ABC transporter, permease protein, putative |
Protein accession | YP_002426028 |
Protein GI | 218666993 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.168111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATATTC AGCGCCTACT GGCCATGGCT TACAAGGAGA CGCTGCAAGT CTGGCGGGAT CCGCGCAGCC TGGCCGTCGC GCTGCTGATG CCGCTGATGC AAATGGGCCT GCTCGGCTAC GGCGTGAGTC TCGACATCAA GCACGTGCCC CTGTGCGTCT ACGACCAGGA GAACAGCCAG GCCAGCCGCG CGGTAGTCGA CGATTTCACG GCTTCGAACT GGTTCACCAT CAGCCATACC ATCGCCTCCG AGGCCGGCAT CCGCCGGGCA ATGGACCGCG GTGAATGCGC CGCAGCGGTC GTCATCCCGG TGGACTTCTC CCGCACCCTC GCCGCGACCG GAAGTGCGCC GGTGCAAGCC ATCTTCGACG CCACCGACGT CAATACCACC AACATAGCGA TGGGCTATGC CCAGGGTGTG GTCGCCCAAG CCAATGCCAC GATTGCTGCC CGATGGGCCG CCAGCCATGG CGTTCAGCCG TCGCTGGTCG GACAGGTCGA TTTCGAACCC AGCGTCTGGT TCAATGAAAC CCTGGAAAGC CGCAACTTCA TCATCCCTGG GGTAGTCGCG GTGATCCTTG CGCTGGTCGG CGCCCAGCTC ACCTCGCTGA CCATCTCGCG CGAGTGGGAG CGGGGAACCA TGGAGCAACT GATCTCAACC CCGGTCACTC CGCTCGAGGT CATGTTCGGC AAGCTTATAC CGTACTTCGC CATCGGTTTG CTCGATGCGG CGTTCTGCCT GGCCGTCGCA GTCTTCTGGT TCCACGTCCC GTTCCGCGGA AGCATCGGCA TACTGTTCGT GACGACCGCC CTCTTCGACC TTGTCGTGCT GGGGATCGGC TACCTCATCT CCGTGCGCAT CCGCAACCAA CTCGGGGCGA GCCAGGTCGC CCTTTTGCTG ACCATGCTGC CTACCACCCT CCTGTCAGGC TACACCTTCC CCATCGACCA GATGCCGGCT GCGATCCAGG TCCTCACATA TGCCGTCTAT TCGCGATACT ACGTTACCAT TCTGCGCGCG ATCTTCCTCA AGGGTAGCGG GCTGACCGAT CTGTGGACGC CAGTCCTCGG CCTCGTCGCC TATGCCGCGA TCATCATCTG GCTCGCCGCC AGAGCCTTCC GCAAGCATCT GTAG
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Protein sequence | MNIQRLLAMA YKETLQVWRD PRSLAVALLM PLMQMGLLGY GVSLDIKHVP LCVYDQENSQ ASRAVVDDFT ASNWFTISHT IASEAGIRRA MDRGECAAAV VIPVDFSRTL AATGSAPVQA IFDATDVNTT NIAMGYAQGV VAQANATIAA RWAASHGVQP SLVGQVDFEP SVWFNETLES RNFIIPGVVA VILALVGAQL TSLTISREWE RGTMEQLIST PVTPLEVMFG KLIPYFAIGL LDAAFCLAVA VFWFHVPFRG SIGILFVTTA LFDLVVLGIG YLISVRIRNQ LGASQVALLL TMLPTTLLSG YTFPIDQMPA AIQVLTYAVY SRYYVTILRA IFLKGSGLTD LWTPVLGLVA YAAIIIWLAA RAFRKHL
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