Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1578 |
Symbol | |
ID | 7136872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1371201 |
End bp | 1371575 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643529966 |
Product | PIN domain protein |
Protein accession | YP_002426005 |
Protein GI | 218666342 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0937354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTCTGG TCGATACCTC CGTCTGGATC GACCATTTTC GCTCTGGAGA TGCACACCTC TCTACTCTGC TTGATCATGC CATGGTGCAA ACGCACGATT TCATCATCGG AGAAATCGCT TGCGGGAATC TCAAAAATCG GCAGCAGACC TTATATCTGC TCTCAGGCTT ACCCCGATGC ACCGCCACCT CTCCAGAAGA AACCCTGTTT TTTATTGGGC GTCACGGCCT GATGGGACGC GGTATAGGCT ATATTGACGC GAGTATCCTA GCCTCCGCCA TGCTCGTGCA GGCCAATTTA TGGTCCCGCG ACAAACGTCT CATGGCTCTG GCTACCGAAC TTGGCTGCGC GTACTCGCCG ACGTCATCCG AATAG
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Protein sequence | MILVDTSVWI DHFRSGDAHL STLLDHAMVQ THDFIIGEIA CGNLKNRQQT LYLLSGLPRC TATSPEETLF FIGRHGLMGR GIGYIDASIL ASAMLVQANL WSRDKRLMAL ATELGCAYSP TSSE
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