Gene AFE_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1578 
Symbol 
ID7136872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1371201 
End bp1371575 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content53% 
IMG OID643529966 
ProductPIN domain protein 
Protein accessionYP_002426005 
Protein GI218666342 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0937354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTCTGG TCGATACCTC CGTCTGGATC GACCATTTTC GCTCTGGAGA TGCACACCTC 
TCTACTCTGC TTGATCATGC CATGGTGCAA ACGCACGATT TCATCATCGG AGAAATCGCT
TGCGGGAATC TCAAAAATCG GCAGCAGACC TTATATCTGC TCTCAGGCTT ACCCCGATGC
ACCGCCACCT CTCCAGAAGA AACCCTGTTT TTTATTGGGC GTCACGGCCT GATGGGACGC
GGTATAGGCT ATATTGACGC GAGTATCCTA GCCTCCGCCA TGCTCGTGCA GGCCAATTTA
TGGTCCCGCG ACAAACGTCT CATGGCTCTG GCTACCGAAC TTGGCTGCGC GTACTCGCCG
ACGTCATCCG AATAG
 
Protein sequence
MILVDTSVWI DHFRSGDAHL STLLDHAMVQ THDFIIGEIA CGNLKNRQQT LYLLSGLPRC 
TATSPEETLF FIGRHGLMGR GIGYIDASIL ASAMLVQANL WSRDKRLMAL ATELGCAYSP
TSSE