Gene AFE_1554 details

Gene Information

• Locus tag: AFE_1554
• ID: 7136132
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: -
• Start bp: 1346142
• End bp: 1346795
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 643529942
• Product: hypothetical protein
• Protein accession: YP_002425982
• Protein GI: 218665566
• COG category: [S] Function unknown
• COG ID: [COG2149] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGTTTC TGAAATACTT GCCGACGGTA CAGGAACCCC GGCTGTACAT GGCCTTGGAA 
CGAACCTACC TGGGTTATTT CAAGCTCCTC TTCCTGTCGA TAGGCACCGG CCTGCTTTCC 
GCACGCCTGG CCATTCTCTT CAAGGCACTC CACTACGCTA CCCTGGGCCA CTTTTTTACC 
GAGCTTTTCT ACTGGCTGAG CTGGCCCGCC ATCGCCCTGG TTTTTGTGGT AGGATTTCGT 
TTTATGTCGG ACCTGGAATA TATCGAAAAA GGATCTCCCG TGGCTGCGAA AGAAATCATT 
GATCCGCGCA TTTACATGGC CGCCGAGCGT ACCTTCCTCG CCTGGGTACG CACCGGCATC 
GGCCTGATTG CCTTCGGTTT CGTGATCGAA AAATTCGATT TTTTCCTGGA GCAACTCTCC 
ATCATGCTCC ATACCAAACT CGTGATGGGC GCGGGCTTTT CCGGGATGGG CATCGTTTTC 
ATTCTTCTCG GGGTCACCAA TCTGGTCATC GGTGGCATCA ACTTCATTCG TACGGTCAAA 
AAAGTGGACG AGGGCACTTA TCATGTCCAC AAATTTCTCT ACGGCCTCTA TGGAGTCATT 
CTGCTGAGTA TCACCATCGT GCTGGCTGCC ATGATCATCC ATGTGTCGCC CTGA 

 

Protein sequence

MMFLKYLPTV QEPRLYMALE RTYLGYFKLL FLSIGTGLLS ARLAILFKAL HYATLGHFFT 
ELFYWLSWPA IALVFVVGFR FMSDLEYIEK GSPVAAKEII DPRIYMAAER TFLAWVRTGI 
GLIAFGFVIE KFDFFLEQLS IMLHTKLVMG AGFSGMGIVF ILLGVTNLVI GGINFIRTVK 
KVDEGTYHVH KFLYGLYGVI LLSITIVLAA MIIHVSP