| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1534 |
|---|
| Symbol | |
|---|
| ID | 7136054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 1328839 |
|---|
| End bp | 1329630 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643529922 |
|---|
| Product | leucine rich repeat protein |
|---|
| Protein accession | YP_002425962 |
|---|
| Protein GI | 218666645 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.461611 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACC CGAATGAGGC CGTTGACTGG CAGGGCTGCG CAGTCTCCTG TAAGACTTGT
CCCGAGCGCG AGATCCCGGG GCTGAAGTGT AAACTTTTGC ATGCCTGTAT GCACGATCGT
TACGCCAAAA GAGTGGATCG CTTTTTTCGC TGGAATCCAC AGATCGCCAA GGATTATCTG
CAACACGGCT ACTTTGAAGT GCGGGCTTGC GCCGCGCGTT ATGCGGATAT TTTTCATCTG
CCGGCGCTCA TGAACGATCC GGATGAAACC GTGCGCTGGG CAGTAGCGCA GCGGCTTCCG
CAACGCTATC TGCTGCGCAT GATCCACGAT CCGCATCGGG AAGTGCGTAT CCGGGTAGCG
GCGCGGCTGG ATGAACGTAA TCTGTCTGCC ATGATGCACG ATGCGGATTA TTACGTGCGT
CTGGAGGTGG TGCGTCGCCT GCCCAAAGGT CTATTGGCGC TCATGATGCA TGATTCCGAC
GTGGAGGTTC GGCGCGTTGT GGCCAAACGT ATCGGCGTGG ATGCTCTGGT CAAAATGCTG
CGGGACGATG ATCCCGGGGT CCGTCTCGAT GCCATTGAAC GTGTACCGGT GTCGACCCTT
TCCACACTAG TTGACGATGC GGATTGGCGT ATCCGCTACG AGGTGGCGGC GCGCGGGAGC
CAGGAAGCGG TAATCAGCCT GTTGGCGGAT GAGGATTATG AGGTGCGTCG TTGCGCCGCG
GAACGCTTAG GGAAAGGCGA ACCACTTTCC AGACAACGAT TGCCAGGGGA GGGTGGGATA
TGGCCGGAAT GA
|
|---|
| Protein sequence | MSDPNEAVDW QGCAVSCKTC PEREIPGLKC KLLHACMHDR YAKRVDRFFR WNPQIAKDYL
QHGYFEVRAC AARYADIFHL PALMNDPDET VRWAVAQRLP QRYLLRMIHD PHREVRIRVA
ARLDERNLSA MMHDADYYVR LEVVRRLPKG LLALMMHDSD VEVRRVVAKR IGVDALVKML
RDDDPGVRLD AIERVPVSTL STLVDDADWR IRYEVAARGS QEAVISLLAD EDYEVRRCAA
ERLGKGEPLS RQRLPGEGGI WPE
|
|---|
| |