Gene AFE_1522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1522 
SymbolnifH 
ID7137267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1319920 
End bp1320810 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content57% 
IMG OID643529910 
Productnitrogenase reductase 
Protein accessionYP_002425950 
Protein GI218667119 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01287] nitrogenase iron protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGACA AATTAAGGCA AATCGCCTTT TACGGTAAGG GGGGCATTGG CAAGTCTACC 
ACCTCCCAGA ATACCCTGGC AGCCCTTACG GAAATGGGCC AAAAGATTCT CATCGTCGGC
TGCGACCCCA AAGCTGACTC CACCCGTTTG ATTCTTCACT CCAAAGCACA GGACACCGTA
CTGAGCCTCG CGGCTGAGGC GGGCAGCGTG GAGGATCTGG AAATCGAAGA CGTTATGAAA
GTCGGTTACA GGGATATCCG CTGCGTGGAA TCCGGTGGAC CGGAGCCGGG CGTCGGTTGC
GCCGGGCGTG GCGTTATCAC CTCCATCAAC TTCCTGGAGG AAAATGGTGC CTATGACGGC
GTCGATTACG TCTCCTATGA CGTGCTGGGC GACGTGGTGT GTGGCGGATT CGCGATGCCC
ATTCGTGAAA ACAAGGCGCA GGAAATCTAC ATCGTCATGT CTGGCGAAAT GATGGCCATG
TATGCCGCCA ACAACATCTC CAAGGGCATT CTCAAGTACG CCAATTCGGG CGGCGTACGT
CTGGGCGGGC TGGTGTGTAA CGAACGCCAG ACCGACAAGG AACTGGAATT GGCGGAAGCC
CTGGCTGGCA AGCTGGGTAC CAAGCTCATT CACTTCGTGC CCCGCGACAA CATCGTGCAG
CATGCGGAAC TGCGGCGGAT GACGGTACTG GAATACGCAC CGGAATCCAA GCAGGCCGAG
GAGTACCGTC AGTTGGCACA GAAAATCCAT GCCAACGGCG GTAACGGCAC GATTCCGACC
CCGATCACCA TGGACGAGCT GGAAGAAATG CTCATGGAGT TCGGCATCAT GAGTGCGGTA
GACGAGAGCG TGATCGGCAA GTCGGCCGCC GAACTGGCCG CTGCGGTCTG A
 
Protein sequence
MSDKLRQIAF YGKGGIGKST TSQNTLAALT EMGQKILIVG CDPKADSTRL ILHSKAQDTV 
LSLAAEAGSV EDLEIEDVMK VGYRDIRCVE SGGPEPGVGC AGRGVITSIN FLEENGAYDG
VDYVSYDVLG DVVCGGFAMP IRENKAQEIY IVMSGEMMAM YAANNISKGI LKYANSGGVR
LGGLVCNERQ TDKELELAEA LAGKLGTKLI HFVPRDNIVQ HAELRRMTVL EYAPESKQAE
EYRQLAQKIH ANGGNGTIPT PITMDELEEM LMEFGIMSAV DESVIGKSAA ELAAAV