Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1522 |
Symbol | nifH |
ID | 7137267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1319920 |
End bp | 1320810 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643529910 |
Product | nitrogenase reductase |
Protein accession | YP_002425950 |
Protein GI | 218667119 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGACA AATTAAGGCA AATCGCCTTT TACGGTAAGG GGGGCATTGG CAAGTCTACC ACCTCCCAGA ATACCCTGGC AGCCCTTACG GAAATGGGCC AAAAGATTCT CATCGTCGGC TGCGACCCCA AAGCTGACTC CACCCGTTTG ATTCTTCACT CCAAAGCACA GGACACCGTA CTGAGCCTCG CGGCTGAGGC GGGCAGCGTG GAGGATCTGG AAATCGAAGA CGTTATGAAA GTCGGTTACA GGGATATCCG CTGCGTGGAA TCCGGTGGAC CGGAGCCGGG CGTCGGTTGC GCCGGGCGTG GCGTTATCAC CTCCATCAAC TTCCTGGAGG AAAATGGTGC CTATGACGGC GTCGATTACG TCTCCTATGA CGTGCTGGGC GACGTGGTGT GTGGCGGATT CGCGATGCCC ATTCGTGAAA ACAAGGCGCA GGAAATCTAC ATCGTCATGT CTGGCGAAAT GATGGCCATG TATGCCGCCA ACAACATCTC CAAGGGCATT CTCAAGTACG CCAATTCGGG CGGCGTACGT CTGGGCGGGC TGGTGTGTAA CGAACGCCAG ACCGACAAGG AACTGGAATT GGCGGAAGCC CTGGCTGGCA AGCTGGGTAC CAAGCTCATT CACTTCGTGC CCCGCGACAA CATCGTGCAG CATGCGGAAC TGCGGCGGAT GACGGTACTG GAATACGCAC CGGAATCCAA GCAGGCCGAG GAGTACCGTC AGTTGGCACA GAAAATCCAT GCCAACGGCG GTAACGGCAC GATTCCGACC CCGATCACCA TGGACGAGCT GGAAGAAATG CTCATGGAGT TCGGCATCAT GAGTGCGGTA GACGAGAGCG TGATCGGCAA GTCGGCCGCC GAACTGGCCG CTGCGGTCTG A
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Protein sequence | MSDKLRQIAF YGKGGIGKST TSQNTLAALT EMGQKILIVG CDPKADSTRL ILHSKAQDTV LSLAAEAGSV EDLEIEDVMK VGYRDIRCVE SGGPEPGVGC AGRGVITSIN FLEENGAYDG VDYVSYDVLG DVVCGGFAMP IRENKAQEIY IVMSGEMMAM YAANNISKGI LKYANSGGVR LGGLVCNERQ TDKELELAEA LAGKLGTKLI HFVPRDNIVQ HAELRRMTVL EYAPESKQAE EYRQLAQKIH ANGGNGTIPT PITMDELEEM LMEFGIMSAV DESVIGKSAA ELAAAV
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