Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1517 |
Symbol | nifE |
ID | 7136414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1314558 |
End bp | 1315949 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643529905 |
Product | nitrogenase molybdenum-cofactor biosynthesis protein NifE |
Protein accession | YP_002425945 |
Protein GI | 218665869 |
COG category | [C] Energy production and conversion |
COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
TIGRFAM ID | [TIGR01283] nitrogenase molybdenum-iron cofactor biosynthesis protein NifE |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.302679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCAGA ACAAAATCCA GGATGTTTTT AATGAACCGG GATGCAGCAA GAACCAGAGC AAGTCCGACA AAGAGCGCAA GAAAGGCTGC ACCAAGGCGC TGCAGCCGGG CGGCGCGGCC GGTGGTTGCG CTTTCGATGG GGCAAAGATT GCCTTGCAAC CCATTACCGA CGTCGCCCAC CTGGTCCACG GTCCCATCGC CTGTGAGGGC AACTCCTGGG ATAACCGCGG CTCCAAATCG TCTGGTTCGC AACTGTATCG CACCGGCTTT ACCACCGACA TCAATGAACT GGATGTGGTC TACGGCGGCG AAAAACACCT CTTCAAATCC ATCAAGGAAG TACTTGATAA ATACGATCCG TCGGCGGTAT TTGTCTATCA GACCTGCGTG ACGGCAATGA TCGGAGACGA TATCGAATCC GTCTGTAAAG CGGCCAGTCA AAAATTCGCA AAGCCCATTA TTCCGGTCAA TGCCCCCGGT TTTGTCGGCG CCAAGAATCT CGGCAACAAA CTGGCGGGAG AGGCCCTGCT GGATTATGTG ATCGGCACGG AGGAGCCAGA ATATAGTACG CCCTATGACA TCAATATCAT TGGCGAATAC AATCTTTCCG GTGAACTCTG GCAGGTCAAA CCACTTCTCG ATCATTTGGG GATCCGGGTA ACCTGTTGCA TCAGCGGTGA CGCCAAATAT CACGACGTGG CGCAATCCCA TCGTGCCAGG GCCAATATGA TGGTCTGCTC TAAATCCATG ATCAATATCG CCCGCAAAAT GGAAGAGCGT TATCAGATTC CGTTCTTTGA AGGGTCCTTT TATGGCATCT CCGATACCAC GGAGTCGCTC CGGGAGATCA CCCGCCTGCT GATCCAGCAG GGTGCCCCGG CAGAGCTCCA CGACCGCACC GAAGCGCTGA TCGCCCGGGA AGAGGCAAGG GCCTGGCAAC GTATCGCCGA ATACACCCAT CGCCTGCGCG GCAAACGGGT GTTGCTCTTT ACGGGGGGCG TCAAATCCTG GTCGGTGGTA TCTGCATTGC AGGAAGGCGG GATGGAAGTG GTGGGAACCA GCGTCAAGAA ATCCACCAGG GAGGACAAGG AAAGAATCAA GGAAATCATG GGTCAGGATG CGCATATGCT GGATGACCTG ACCCCTCGGG AAATGTACAA AATGTTTCAG GAGGCGCGTG CGGATGTGTT GCTGTCGGGC GGACGTTCAC AATTTGCGGC CCTCAAAAAC AAAATGCCCT GGGTGGACAT CAACCAGGAA CGCCATCAGG CCTATAACGG TTATGAAGGG ATGGTCAACC TGGTGAAACA GATCGATTTG GCCCTCTACA ATCCCATGTG GGCCTTGTTG CGCAAACCCG CGCCCTGGGA TATGGGGGAG GCACGGACAT GA
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Protein sequence | MLQNKIQDVF NEPGCSKNQS KSDKERKKGC TKALQPGGAA GGCAFDGAKI ALQPITDVAH LVHGPIACEG NSWDNRGSKS SGSQLYRTGF TTDINELDVV YGGEKHLFKS IKEVLDKYDP SAVFVYQTCV TAMIGDDIES VCKAASQKFA KPIIPVNAPG FVGAKNLGNK LAGEALLDYV IGTEEPEYST PYDINIIGEY NLSGELWQVK PLLDHLGIRV TCCISGDAKY HDVAQSHRAR ANMMVCSKSM INIARKMEER YQIPFFEGSF YGISDTTESL REITRLLIQQ GAPAELHDRT EALIAREEAR AWQRIAEYTH RLRGKRVLLF TGGVKSWSVV SALQEGGMEV VGTSVKKSTR EDKERIKEIM GQDAHMLDDL TPREMYKMFQ EARADVLLSG GRSQFAALKN KMPWVDINQE RHQAYNGYEG MVNLVKQIDL ALYNPMWALL RKPAPWDMGE ART
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