Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1489 |
Symbol | |
ID | 7134612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 1288563 |
End bp | 1289594 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643529877 |
Product | iron compound ABC transporter, periplasmic iron-binding protein, putative |
Protein accession | YP_002425917 |
Protein GI | 218665443 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.236067 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCTGC GTTTTCTGTT CACGGTGATA TTAACAGGAA TCATGGGTAT TGCTTCGTTC CAGACCGCGA CCGCACAAGT CGTGATGGAC ATGTCCGGGC AGCCCGTGAA CATTCCCCAA CCATTAGACA AGGTTTTTGG CAGCGCACCC CCGGTCAATG CCCTCATTTA CACCCTGGAT CCCCATCTTC TCGCGGGATG GAATCTGCCC TTGTCGCCAT CGCAACGCAA ATATCTGGAT CCGGCGGCGC GTCATCTGCC CGTCCTGGGA GGTTGGTTCG GGCAGGGTTA CAATGCCGAT ATCGGCACGA TTTTACAGGC GCATCCTGAT CTCATCGTAT TCTGGTATCC CTATATGGGC CCCCAGGCGA GCGTGGTGAG CAAATTGCGT GCTCTGGGAC TTCCCGTATT AAACGTAAAA CTCCATGATC TGGCTGATTA TATCCAGGCG TATCGGCTGC TTGGCGAAGC GTTTCACAAG CAGACGCGTG CCGAAAACCT GATCCGCTAT CTTTCTGAAA AGAAAGACGC GCTTCAGAAT CTCCACACGC AGATTCCGGA ACCGAACCGG GTTTCCGTGT ATTACGCAGG CAGTCCGAAT GGATTGCGCA GTGGCTGCGA TGAGGCCATG CCGACCGCCA CCATACAATG GGCGGACGGG GAAAATGTTT TCCACTGCAC TATCAATCAC TTTCAAGGCT ATCAGCAAGT AAGCATGGGA CAGGTATTAC GCTGGAACCC TGAGGTGATT CTCAGTGATA ATCCCATATT TTTGGCCCAG GTGTATACCA ATCCCGCATG GGCGCCTTTG CAGGCGGTGC GGCACCATCG CGTTTACTAT ATCCCCCAGC AACCCTTCAG TTGGTTCAAC CGCCTGTATT CCTTTATGCA GATACTGGGT GCGCAATGGC TTGCCCATAA GCTTTATCCC CAACAATTTG CCTTCAGCGA CAAAGATATC CAGAATTTTT ATCAGCAGTT TCTCGGGGTG AAAATCAGCG ATGCCCGGCT TCGGGAGATC ATGCAGCCAT GA
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Protein sequence | MRLRFLFTVI LTGIMGIASF QTATAQVVMD MSGQPVNIPQ PLDKVFGSAP PVNALIYTLD PHLLAGWNLP LSPSQRKYLD PAARHLPVLG GWFGQGYNAD IGTILQAHPD LIVFWYPYMG PQASVVSKLR ALGLPVLNVK LHDLADYIQA YRLLGEAFHK QTRAENLIRY LSEKKDALQN LHTQIPEPNR VSVYYAGSPN GLRSGCDEAM PTATIQWADG ENVFHCTINH FQGYQQVSMG QVLRWNPEVI LSDNPIFLAQ VYTNPAWAPL QAVRHHRVYY IPQQPFSWFN RLYSFMQILG AQWLAHKLYP QQFAFSDKDI QNFYQQFLGV KISDARLREI MQP
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