Gene AFE_1485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1485 
Symbol 
ID7135891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1286578 
End bp1287231 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content60% 
IMG OID643529873 
ProductMotA/TolQ/ExbB proton channel family protein 
Protein accessionYP_002425913 
Protein GI218667595 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATTT TATTACACCT TGCCGCCGTG TCCGGGGGTA TCCTTTATCT GATGCCGCTC 
CTGTTGCTGG TGGTGCTTTT CGTGGCCCTG GAGCGGGGCT GGGCGTTGGC CATGATCCGG
CGCAAGGGGG ACGATCTGTT ACGCGATCTG CAAGACAGAA AAGGCCGGGA ATCGCTGGAA
ACCGAGCTGG CCAAAACGCC GTCTTGCCCG CAACAGGCCG TATTTGCAGC AGTGTTGGCA
TCCCATGATC TGGCAAGCGG CGAGGCCTAC GCCGAGGAGG CCATGCTGAC CCAGGCGACC
TTGCTGGACC GGGGCTTATG GATCCTGGAT ACGGCCGTCA CCCTGGCGCC TCTGCTCGGG
CTGCTGGGCA CCATCATCGG TATGTTCAAT GCCTTTCAGA TATTGGGTAA TCCAGATACC
GCGCCAACGG CCATTACCGG TCATGTGGCG GAAGCCCTGG TGGCTACCGC AACGGGTTTG
GCCATTGCCA TTGTGGGCCT GGTGCTTTTT AACGGACTTC AGCAACGGGT CCGTCTGGTG
CTGCATCAGA TGGAAAGGAT CAAGGTGAGC ACCCTGAATC GCCTCTACCG ACAGCCACCG
AGTATCCGGG GAGACGCCTC TGTCAGTCTG CTGGCGCGGC GAGGGGAGAT CTGA
 
Protein sequence
MEILLHLAAV SGGILYLMPL LLLVVLFVAL ERGWALAMIR RKGDDLLRDL QDRKGRESLE 
TELAKTPSCP QQAVFAAVLA SHDLASGEAY AEEAMLTQAT LLDRGLWILD TAVTLAPLLG
LLGTIIGMFN AFQILGNPDT APTAITGHVA EALVATATGL AIAIVGLVLF NGLQQRVRLV
LHQMERIKVS TLNRLYRQPP SIRGDASVSL LARRGEI