| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1461 |
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| Symbol | dnaE |
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| ID | 7135551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1262301 |
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| End bp | 1265801 |
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| Gene Length | 3501 bp |
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| Protein Length | 1166 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643529849 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_002425889 |
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| Protein GI | 218665927 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTACGC CGCAGTTCGT CCATCTGCAC GTACACTCCG AATACTCCCT GGAAGACGGA
ATCATTCCGG TCAAGGCGCT GGCCAGACGC TGCGCGGAGC GAGGCATGCC GGCCGTGGCG
ATCACTGATC ACGGCAACCT TTTTGCCCTG GTGAAATTTT ATAATGCTGC CCGGGGGCAG
GGCGTCAAGC CATTGATTGG CAGTGAAGTC TGGGTGCATG ATGTGGCAGA ACCGGAACGA
CCGGTCAGCC TTGTCCTGCT GTGCATGGAC AAAACCGGTT ACCGTAACCT CAGCCGCCTG
CTCAGCCGGG CTTACCTGGA GGGCAGTCGC CACGGTCGTC CGCAGATCGA CGTGGCATGG
CTGGAAGGGT CGAGCGACGG TCTCATTGCC CTGTCTGCGG CAGGGCAGGG GGAGATCGGG
CGTGCCCTGC AGCGCCATCC GCAACAGGCG GAAAGCCGGG CGCGATACTA CGCAAGGCTT
TTCCCGGAGC GTTTTTATCT GGAGGTGCAG CGCAACGGTG AGGCGGAACA GGAGGCCCTG
GTCCAGGCCA CGGTGGCGCT GGCGGAAAAA CTGGATTTAC CGCTGGTGGC CACCAATAAC
GCCCACTTTC TCGATGCGGC GGACTTTGCG GCTTTCGACG CGCGACAGTG TATTTCTGCG
GGCTTTACCC TGGACGACCC GCGCCGTCCA CGGCGTTTTA CGCCGGAGCA CCGCCTGCCG
GACCCCGAAG AAATGCGAGA GCGTTTTGCG GACCTGCCGG AAGCTTGCGA CAATACCGTC
GAAATTGCGC GACGCTGTAA TATGGAGCTG GTGCTTGGGC ATTATGCGCT ACCGGACTAC
CCCATTCCCG CCAACCAGTC CGTGGATGAA TATTTGCACG ACGCGGCGCA AAAAGGTCTG
CAGGAACGCT TGCAGGAGCT GCGTATCACC GGCGACGCCA CGCTGCCTTA TCACGAGCGC
CTGTTGCGTG AGGTCGGCGT CATTCAGCAG ATGGGCTTCC CCGGTTATTT TCTCATCGTC
GCGGATTTCA TCCAGTGGGC AAAAAATAAT GGCGTGCCGG TAGGACCTGG TCGTGGTTCC
GGCGCCGGAT CGCTGGTGGC CTACGCACTA CGGATCACCG ATCTCGATCC CATCGGCAAT
GGCCTGTTGT TCGAGCGCTT TCTCAATCCC GAACGCGTTT CCATGCCTGA CTTCGACGTG
GATTTCTGCA TGGATCAGCG TGACCGCGTC ATTCAGTATG TGGCCGACAA ATACGGTCGT
GACCGGGTCG GCCAGATCAT CACCTTTGGG ACGATGAAGG CGCGGGCGGT GGTGCGTGAT
GTCGGCCGGG TGCTGGGTCT ACCGTATGGC TTTGTCGACC AGTTGGCCAA GCTGGTGCCG
GGTGATCTGG GAATGACCCT GGCGAAGGCC CTGGAGGAAT CGGAGGAACT GCGGCGACGC
CAGGCTGAGG AAGACGACGT CCGCGACCTG CTGGACATCG CCTTGCGCCT GGAGGGTTTG
CCCCGTCACG CCTCGACCCA TGCGGGTGGC GTGGTGATCT CCCCGGAGCC ACTGGCCGAC
CGCCTGCCGC TCTTTAACGA CGGCTCTGAA GGGGGGGGTA ACGTCACCCA GCTCGATAAG
GACGATGTAG AAAAGATGGG GTTGGTGAAG TTCGACTTTC TCGGCCTGCG TACCCTGACC
ATCATCGATA TGGCGGTCAA GCTCATCAAT GCCGATGCGG CAGCGGCGGG TCGTGCGCCC
GTGGATATTC AGCAATTGCC TTTGGACGAT GCGGCGACTT TCGCCCTGCT CAAGTCCACC
GAGACGGCGG CGGTCTTCCA ACTGGAATCA TCGGGTATGC GCGATCTGGT GCGGCGCCTG
CAGCCGGATA CTTTTGAAGA TATCGTCGCC CTCGTCGCCC TGTTTCGGCC GGGGCCGCTA
CAGTCGGGTA TGGTGGATGA TTTCATCGCC CGCAAACACG GCAAGGCGCA GGTAACCTAT
CTGCATCCGG ATCTGGCACC GATTCTCCGG GAAACCTATG GGGTGATTGT CTATCAGGAA
CAGGTCATGC AGTCCGCCCA GGCGCTGGCG GGTTATTCCC TCGGCGGTGC CGATTTACTG
CGGCGCGCCA TGGGCAAGAA AAAGCCGGAG GAAATGGCCA AGCAACGCAG CATTTTCCTG
GAGGGAGCCC ACAAGAACGG TTTGGCCGCG GACCAGGCCG GGGCCATCTT CGACCTCATG
GAAAAGTTTG CGGAATATGG CTTTAACAAA TCCCACTCGG CAGCCTATGC CCTGGTGTCC
TACCAAACCG CTTATCTGAA GGCCCACTAT CCGCAGTTTT TTATGTCTGC CGTGCTGACC
GCAGATATGG ACCACACCGA CAAAGTTGTG GCGATGATTG CCGAGTGCGC GCGCATGGGC
CTGCGCATTG CTCCACCGAG CGTTCAGCAC AGTGTGCTGG AGTTCCGGCC GGAGGGGGAT
GATCATATCC GCTTTGGTCT GGGTGCCATC AAGGGCTTGG GACGGGCGGC CATTCAGGCG
ATTCTCGACG CCCGTAGAGG AGGCGCCTTC CTGAATCTCT TCGATCTGCT CTGCCGGGTG
GATACCCAGA AAATCAATCG TCGTGCCCTG GAGGCATTGA TTCGCGCCGG AGCCATGGAT
GACTGGGGCG TGTCGCGGGC CAGCCTGATC GCTTCCGTGG ACGGTTGTAT GGAAGCAGCG
GCGCAGTTTC AGAGCAGTCA GGCGAGCCTG CAGGAATCAT TGTTTAGCGG ACAGGAAGCG
TTGCGGGTAG CGCCGCCGCT GGTGTCTGCC GAGGCATGGA GCCTCACCGA AACCCTGCGT
CAGGAACGGG AAACTCTGGG CTTCTATCTC AGTGGTCACC CCATGGACAG TCTGCGGGAT
GATCTGACGG CGCTGGGAAC GATACCTCTT GGCGACGTCG CGGTCGGGTC CACGGTATTG
GTGGCGGGGT TGGTGGTAGC GCGGCGCAGC ACCCGGACCA AGCGCGGTGA TCGTATCTAT
TTCCTGACCC TCGACGATGG TCAGGGGCGG CTGGAGGTCG TCGTCTTTGG CGAAGTCTGG
GCGCGGGCCG GCAAGATCCG AGAGGGTGAG GAGCCGGTGC TGGTTCTGGG TGAGGTGGGC
GAGGACAGCT ATTCTGGCGG CCTGCGGCTC AGTGCCCTGC GTCTGCTGGA TACGGCACAG
GCGCGTGAGG AATTGGCTGC CCAATTGACC TTGGATCTGG GTCTTGCCGA AGATATGGCG
CCGCGAGATC TGCTTGCCGT GCTCCGTAAG TATCCTGGCC AAACGGCCTT GCGCCTGCGT
TTGCGGGTCG CAGACGACGT TGTCGCGCAA TTGCGGGTGA CGGAAAACCT GAGCTTCGCG
GCGAGTCCCG CCGCCATTGC CGCCCTGACG GCGTTGGCAC CCGCGGCGCA CTGGCACTGG
AGCTATCGGC CGGTGACCCT TCTCGTCAAT AATGTCGTCC CCCTGGAGCG TGCACGGCAC
GCGACGCGAC GCCCGGCCTG A
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| Protein sequence | MRTPQFVHLH VHSEYSLEDG IIPVKALARR CAERGMPAVA ITDHGNLFAL VKFYNAARGQ
GVKPLIGSEV WVHDVAEPER PVSLVLLCMD KTGYRNLSRL LSRAYLEGSR HGRPQIDVAW
LEGSSDGLIA LSAAGQGEIG RALQRHPQQA ESRARYYARL FPERFYLEVQ RNGEAEQEAL
VQATVALAEK LDLPLVATNN AHFLDAADFA AFDARQCISA GFTLDDPRRP RRFTPEHRLP
DPEEMRERFA DLPEACDNTV EIARRCNMEL VLGHYALPDY PIPANQSVDE YLHDAAQKGL
QERLQELRIT GDATLPYHER LLREVGVIQQ MGFPGYFLIV ADFIQWAKNN GVPVGPGRGS
GAGSLVAYAL RITDLDPIGN GLLFERFLNP ERVSMPDFDV DFCMDQRDRV IQYVADKYGR
DRVGQIITFG TMKARAVVRD VGRVLGLPYG FVDQLAKLVP GDLGMTLAKA LEESEELRRR
QAEEDDVRDL LDIALRLEGL PRHASTHAGG VVISPEPLAD RLPLFNDGSE GGGNVTQLDK
DDVEKMGLVK FDFLGLRTLT IIDMAVKLIN ADAAAAGRAP VDIQQLPLDD AATFALLKST
ETAAVFQLES SGMRDLVRRL QPDTFEDIVA LVALFRPGPL QSGMVDDFIA RKHGKAQVTY
LHPDLAPILR ETYGVIVYQE QVMQSAQALA GYSLGGADLL RRAMGKKKPE EMAKQRSIFL
EGAHKNGLAA DQAGAIFDLM EKFAEYGFNK SHSAAYALVS YQTAYLKAHY PQFFMSAVLT
ADMDHTDKVV AMIAECARMG LRIAPPSVQH SVLEFRPEGD DHIRFGLGAI KGLGRAAIQA
ILDARRGGAF LNLFDLLCRV DTQKINRRAL EALIRAGAMD DWGVSRASLI ASVDGCMEAA
AQFQSSQASL QESLFSGQEA LRVAPPLVSA EAWSLTETLR QERETLGFYL SGHPMDSLRD
DLTALGTIPL GDVAVGSTVL VAGLVVARRS TRTKRGDRIY FLTLDDGQGR LEVVVFGEVW
ARAGKIREGE EPVLVLGEVG EDSYSGGLRL SALRLLDTAQ AREELAAQLT LDLGLAEDMA
PRDLLAVLRK YPGQTALRLR LRVADDVVAQ LRVTENLSFA ASPAAIAALT ALAPAAHWHW
SYRPVTLLVN NVVPLERARH ATRRPA
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