| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1459 |
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| Symbol | lpxB |
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| ID | 7136635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1260570 |
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| End bp | 1261697 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643529847 |
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| Product | lipid A disaccharide synthase LpxB |
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| Protein accession | YP_002425887 |
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| Protein GI | 218666672 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGCAAGG CCTTTATCCT CGCGGTAGAG CGTTCCGGCG AAAATCTCGG GCTGGAAATT
TTGGCGAATG CCGCGCAGGC GGGACTTGAT CTGCAATGGT CCGGGGTGGT CGGATCCCGT
CTGCAGGCGG CGGGCGTGCA AAATATTGCC AATGGTGAAG TGCTGGCGAT GATCGGGTTG
GTCGAAGTCT TGCGGCACTA CGGTCGCTTG CGCAGGCTTT ATGGGCAAAT CCGGCAGCAT
CTGCAGGCGG AACGGCCGGC TTGCGTGGTG CTGATTGATC ATCCTGCTTT CAATCTGCAC
GTTGCCAAGA TGGCCAAGCA GATGGGCATT CGAGTGCTCT ATGTGGTGGG TCCCCAGATC
TGGGCCTGGC GCTCGCAGCG AATCCACCAG ATCAAGCGCG TAGTGGACCA CATGCTGGTG
CTTTTTCCTT TTGAGGTGCC CATTTATGCA CAGGCGGGGG TGCCGGTGCA TGTGCTGGCC
CATCCCTTGC TGGCGCAGAC TGCGACGGCG CAGGACGGAA TGGATGCGCG GGCGGCACTG
GGACTGACGG CAGGGGGGCC GGTGCTTGCG CTCCTGCCGG GCAGTCGCCG CGGCGAGCTG
GAACGTCTGA CTCTACGCTA TGCGGAAACG GCGCGACGTT TGCGCAAACA AATACCGGAT
CTGCGGATTC TGGTGGCCTT GGCCAGGGAG GAGTTGCGCC CCCTCTGGGA GCGGCTCTGG
AAACAGGGTG CGGGGCCGGA AGATGCGCAG TTGGTGGTCG CTCAGACGCA AACCGTGCTG
GCAGCCGCTG ACGTGGTGCT GGTCGCCTCC GGTACCGCCA CACTGGAAAC GGCACTCATG
CGGCGCCCGG CGGTCGTCGT CTATATTTTG AACGCACTCA CCTTTGCTTT CGTCCGAAGA
CTGGTGAAGA CCCCCTTCGT GGCCATGCCC AATATTTTGC TCCAAGAGGC CGTATACCCG
GAATTCCTCC AGGAGGCCTT CGAGCCCGCC CAAGTGGCTG ATGCACTGGC GGCGCTTTTG
GGTCCGGCGG GTTCCGAGCA GGTGGCAAAA TTGCAGAAAC TGCGCAGCCT GCTGGAAGGC
AATCCTCCCG AGCAGTTGCA GCAAGTGCTC CGGGAGATGC TGGCATGA
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| Protein sequence | MGKAFILAVE RSGENLGLEI LANAAQAGLD LQWSGVVGSR LQAAGVQNIA NGEVLAMIGL
VEVLRHYGRL RRLYGQIRQH LQAERPACVV LIDHPAFNLH VAKMAKQMGI RVLYVVGPQI
WAWRSQRIHQ IKRVVDHMLV LFPFEVPIYA QAGVPVHVLA HPLLAQTATA QDGMDARAAL
GLTAGGPVLA LLPGSRRGEL ERLTLRYAET ARRLRKQIPD LRILVALARE ELRPLWERLW
KQGAGPEDAQ LVVAQTQTVL AAADVVLVAS GTATLETALM RRPAVVVYIL NALTFAFVRR
LVKTPFVAMP NILLQEAVYP EFLQEAFEPA QVADALAALL GPAGSEQVAK LQKLRSLLEG
NPPEQLQQVL REMLA
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