Gene AFE_1434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1434 
SymbolphoB 
ID7134906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1237096 
End bp1237827 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content61% 
IMG OID643529822 
ProductDNA-binding response regulator PhoB 
Protein accessionYP_002425862 
Protein GI218665852 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR02154] phosphate regulon transcriptional regulatory protein PhoB 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAAG ACAAGGTATC CTCCCGTGTC CTGGTAGTGG AGGATGAGGA AGGCATTCAG 
GAACTCCTGC GCGTTACCCT GCAGCGTAAT GGCTTTGACG TTCGCTGTGA GGGCAGCGTC
GAATCGGCGG AAGCGGTACT CCAGACCTGG GGGCCGCAGT TGCTGGTGCT CGACTGGATG
CTTCCCGGCA AAAATGGCCT GGCATGGTGC CGTATGCTGC GCCGTCGTGA AGAGACCCGG
AAGCTGCCCA TCATCCTCCT TACCGCGCGC GGTGAAGAGG GTGACAGGGT GCATGGTCTG
GAATCAGGTG CGGATGATTA TCTGGCCAAA CCCTTTTCTC CGCGGGAACT GGTGGCGCGG
GTCAATGCCC TGCTGCGGCG CAGTTACGGT GGTACGGCGG CGGGCCGGGT GCGGCTTGGC
GGTCTGCAGG TGGATCTGCG CGCGCATCGG GTCTACGCCG ATGAGGTACA GGTTCATCTC
GGGCCAACCG AGTTTCGTCT TTTGCGTCTT TTTGTGACCA ATCCGGAACG GGTCTTTTCG
CGGGATATGC TGCTCGATCA GATCTGGGGG CGGCAGAGTT TTGTCGAAGA GCGCACGGTC
GACGTCCACA TTCGCCGCTT GCGTCGGGGG CTGGAGCACC ACGGTTACGC CCAGATCATC
GAAACTGTCA GGGGCGAAGG CTATCGCTGT AGTGCTTTGG GTTTCCAGCG GGAAGTGGTG
GACGAGCGAT GA
 
Protein sequence
MDEDKVSSRV LVVEDEEGIQ ELLRVTLQRN GFDVRCEGSV ESAEAVLQTW GPQLLVLDWM 
LPGKNGLAWC RMLRRREETR KLPIILLTAR GEEGDRVHGL ESGADDYLAK PFSPRELVAR
VNALLRRSYG GTAAGRVRLG GLQVDLRAHR VYADEVQVHL GPTEFRLLRL FVTNPERVFS
RDMLLDQIWG RQSFVEERTV DVHIRRLRRG LEHHGYAQII ETVRGEGYRC SALGFQREVV
DER