| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1396 |
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| Symbol | |
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| ID | 7134259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1210286 |
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| End bp | 1211725 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643529788 |
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| Product | serine protease, DO/DeqQ family |
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| Protein accession | YP_002425828 |
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| Protein GI | 218668070 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.333333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCTTT GTATGGGTTT GGGACTGAGC ATAGGGGCGA TGACGCCTGC TTGGGCGGAT
TCCGGTGCCA GCGGTCAGGC GTTGGTGGGG CTGCCTGATT TTACGCCCAT CGTCAAGCAG
TATGGACCTG CAGTAGTGAA CATCAGCACG ACGGAGACCA GAGTGGCGCG TGGTGTGACT
TCCCCCTTCC CGCCGAACTC TCCCCTGAAT CAGTTTTTCG CCCCCTTCTT TGGCGCACCG
GGGCAACCTG GAGCACCTGG TGGCGGAGCC GGACAGAAAT ATCAGGTGCA ATCCCTGGGT
TCCGGTTTTG TCATCAGCTC CGACGGCTAT ATCGTGACTG CGGCGCATGT GGTGAAAGGG
GCTCAGAAGA TCATTGTCAG TCTCACCAAT CATCATCAAT ATGCAGCTCA CCTGGTGGGC
CTGTCGGCGC GTATGGATGT GGCGTTGCTC AAAATTGACG CGAAGAATCT GCCGGTGGTA
CAGATTGGTG ACTCCAGCAA GCTGGAGGTC GGACAGTGGG TGCTGGCGGT GGGTTCGCCC
TTCGGCTTTG AGAACAGCGT CACCCAGGGT GTGATCAGTG CGACCTCGCG GCCTTTGCCG
GATGATCCCT ACATCCCGTT CGTTCAAACG GATGTGCCGA TCAACCCTGG TAACTCCGGT
GGCCCGCTAT TCAATATGCG CGGTCAGGTC ATCGGCATCA ACGACCAGAT CTATACCAAT
AGCGGTGGCT ACATGGGGTT GTCTTTCTCT ATCCCCATCA ATGTCGCCAT GGATGCGGTC
AAACAGTTAA AGCTGCATCA GAAAGTGCAT TTTGGCTGGC TCGGGGTCAT GATTCAGGAT
GTCAGCATGG ATCTCGCCAA GTCCTTCCAC ATGAAAGAGC CGGTGGGTGC CTTGGTGTCA
CAGGTTGTGC CTGACGGTCC GGCTGCCAAG GCGGGGTTAC GTCCGGGAGA TGTCATTGTC
TCCTTTGACG GTCAGGCCAT CTATAACTCT GGTCAATTAC CGCCGCTGGT GGGAGTATTG
CCCGCCGGTT TCAAGGCGAA GCTGGGGGTT ATCCGTGATG GCAAGCCCAT GAGCCTCAAC
ATCGTGGTGG AGAGTCTGCC CGGCAACCTG GAGAATACGG TGGAATCCGC CGCATCCGGC
GGTCCGGCGC AGGAAGGTGA AGTCAAACGA CTGAATGTGC AGGTGGGTCC GCTGACTGCG
GAGGCACGTA AGCAACTGCA CGTGAATACT GGTGTCCTGG TCCTCGGGGT TGGTGTGGGG
CCGGCGGCAG AAGCCGGTAT TCGTCCCGGT GATGTGATCT TGCAGGTGGC ACAGCAGCAG
ATTACCAATG CCGCCGACTT GCAGAAGCTG GTGGCTGCCT TGCCGGCGGG CCAGCCGATC
CCGGTGCTGG TGCGACGTGG TGAGGGGAGT TTCTATCTGG TGCTTTCGCT GCCGCATTGA
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| Protein sequence | MALCMGLGLS IGAMTPAWAD SGASGQALVG LPDFTPIVKQ YGPAVVNIST TETRVARGVT
SPFPPNSPLN QFFAPFFGAP GQPGAPGGGA GQKYQVQSLG SGFVISSDGY IVTAAHVVKG
AQKIIVSLTN HHQYAAHLVG LSARMDVALL KIDAKNLPVV QIGDSSKLEV GQWVLAVGSP
FGFENSVTQG VISATSRPLP DDPYIPFVQT DVPINPGNSG GPLFNMRGQV IGINDQIYTN
SGGYMGLSFS IPINVAMDAV KQLKLHQKVH FGWLGVMIQD VSMDLAKSFH MKEPVGALVS
QVVPDGPAAK AGLRPGDVIV SFDGQAIYNS GQLPPLVGVL PAGFKAKLGV IRDGKPMSLN
IVVESLPGNL ENTVESAASG GPAQEGEVKR LNVQVGPLTA EARKQLHVNT GVLVLGVGVG
PAAEAGIRPG DVILQVAQQQ ITNAADLQKL VAALPAGQPI PVLVRRGEGS FYLVLSLPH
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