Gene AFE_1390 details

Gene Information

• Locus tag: AFE_1390
• ID: 7134388
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 1203596
• End bp: 1205353
• Gene Length: 1758 bp
• Protein Length: 585 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643529781
• Product: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC
• Protein accession: YP_002425821
• Protein GI: 218665592
• COG category: [C] Energy production and conversion; [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components
• TIGRFAM ID: [TIGR02868] thiol reductant ABC exporter, CydC subunit

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTGATC TTTACCGGCT GCTGAAACTG TTTGGGCCCT TTAAGTTCTG GATGCTGGGA 
GGCGCCTTTC TGGCCCTGCT GACCATTCTT TCCAATTTCG GTCTGCTGGC CCTTTCCGGC 
TGGTTTCTGG CGAGTGCGGC GCTGGCCGGA CTGGGTGGTT ACGCCACCAT GAATTTATAT 
AACTTCTTCC TGCCGGCTGC CGGGGTGCGC GCTTTTGCGA CGACCCGGGT CATCTCGCGC 
TGGCTGGAGC GCATTGTCAC CCATGAGGCG ACGTTCCGTC TGCTGGCCCA GTTGCGCACC 
TGGTTCTACA CCCGCCTCGA GCCGCTCGCG CCCGCCGGGC TGCAAGGTTA TCGTTCCGGC 
GATATTCTTT CGCGCCTCGT CGCCGATATC GATATTCTGA ATAATTTTTA CCTGCGGGTG 
TTTACGCCGT TTCTGGTGGC CGGGGTGGCG ACGCTCACGA TGGCGGGCGT CTTCGCTTTT 
TTCTCCTGGC GGTTGGCCAT TGCACTCTTT CTTTTCCTCG CGGTTACCGG CCTGCTTCTA 
CCGCTCCTCA CGGAGCGGCT GGGTGCGCGC AGTGGCGCCG AGATGACCGG CATCCAGTCG 
GATTACCGGG TACAGGTGGT GGACGGCATG CAGGGCATGG CTGAACTGTT GACCTATAAT 
GCCGGGCCGG AGATTCTGCG ACGCACGGGC ACACTCAACG ATGCGCTGCT CCGGCGGCAG 
GCCCACATGG CGCAGATCGC CGGATTCGGC AACGCCGGCA TGGGATTCAT GGGCAATCTG 
GCGATTTGGG TTGTCGTGGT GCTGGCTATT CCTCTGGTCC ATGGCAGGGT TCTGGGCAAT 
TCGGATCTGC CCCTCCTGGC CCTCGGCGTG ATGGGTTCCT TCGAGGCCAT CGCCGCCTTG 
CCGCTGGCCT TTCAGTTTCT GGGGCAAACC CGCGCGGCCG CGCGCCGTAT TTTTGAGGTG 
GCGGATACGC CCTTGCCGTT TCCGGATGCA TCGGGACCCG CACCGCGGGT GGACCGGCCG 
GATCTGGAGC TCAAGGATCT GCACCTGCGC TATCCCGGCG CCCAACGCGA CGCCCTGGCA 
GGCGTGGACC TCAGCATCCC GGCGGGCACA TGGGTTGCGA TCCTGGGGGC GACCGGGGCT 
GGCAAGAGCA GCCTCGCCAA CCTGCTGCTG CGTTTCTATG ACTATCAATC GGGCAACGCG 
TATCTGGGTG GCCATGAGTT GCGGGATTTC CCGGCAGACA ATCTGCGCGC ATATTTCGCT 
GTCGTATCCC AGCGCTCTTA TCTCTTTCAC AGTACGATCC GCGACAACCT GCTGGTGGCC 
AAGGGCGAGG CGGAGGAGGA TGAACTCTGG GCGGCGCTGG CCACGGCACA GCTTGCGGAG 
TTCGTGCGCA GTCAGCCCCA GGGCCTGGAT ACCATTGTCG GCGAAGGCGG GGTGAAACTC 
TCCGGTGGTC AAGGCCGGAG AGTGGCCATT GCCCGGGCGA TTCTCAAGGA CGCTCCGTGG 
CTGATTCTGG ATGAGCCGAC CGAAGGGCTC GATCCGGTGA CCGAGATGGA GTTCCTCAAA 
GACCTGCGCC AGATCATGGA AGGCCGCACC GTGCTCTATA TTACCCATCG TCTGGTGGGC 
CTGGAGCACA TGGACTGCGT TCATATTCTC GACGAGGGGC GGATCGTGGA GTCGGGGACC 
TATGGGGAGC TTTTACAGCG GGATGGACAA CTCAGCCATT TCGCCACGTT CGGACAGGCT 
ATTCCGGAGA TTCACTAA 

 

Protein sequence

MRDLYRLLKL FGPFKFWMLG GAFLALLTIL SNFGLLALSG WFLASAALAG LGGYATMNLY 
NFFLPAAGVR AFATTRVISR WLERIVTHEA TFRLLAQLRT WFYTRLEPLA PAGLQGYRSG 
DILSRLVADI DILNNFYLRV FTPFLVAGVA TLTMAGVFAF FSWRLAIALF LFLAVTGLLL 
PLLTERLGAR SGAEMTGIQS DYRVQVVDGM QGMAELLTYN AGPEILRRTG TLNDALLRRQ 
AHMAQIAGFG NAGMGFMGNL AIWVVVVLAI PLVHGRVLGN SDLPLLALGV MGSFEAIAAL 
PLAFQFLGQT RAAARRIFEV ADTPLPFPDA SGPAPRVDRP DLELKDLHLR YPGAQRDALA 
GVDLSIPAGT WVAILGATGA GKSSLANLLL RFYDYQSGNA YLGGHELRDF PADNLRAYFA 
VVSQRSYLFH STIRDNLLVA KGEAEEDELW AALATAQLAE FVRSQPQGLD TIVGEGGVKL 
SGGQGRRVAI ARAILKDAPW LILDEPTEGL DPVTEMEFLK DLRQIMEGRT VLYITHRLVG 
LEHMDCVHIL DEGRIVESGT YGELLQRDGQ LSHFATFGQA IPEIH