Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1364 |
Symbol | |
ID | 7137001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 1178442 |
End bp | 1178882 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643529759 |
Product | hypothetical protein |
Protein accession | YP_002425799 |
Protein GI | 218667815 |
COG category | [S] Function unknown |
COG ID | [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00320209 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGATG AGACACGACT GGATCGCAGC AGACAGTGGT TTGATGCAGC ATTTGATGAG CTAAAAGCCT CTAAAACGCT ATTGGATAAT GGATCTTATG CTCAGTCCTG TTTTTATGCG CAACAGTCCG TGGAAAAAGC CATGAAAGGC GTTATGGCCG CCGACGGCAA AGCAATAACC ACGCACTCCA TTGCGAAGTT GATGACTAAT CTGCCCCAGG ATAGTCAGCT CGACGATATG GAACCCATCC GGCTGGATAA ATTTTATATT CTGACGCGTT ATCCGGAATC TCTGCCGGAA GGCGCGAGCA TAAGGCAGAT ATTTGGCAGG CGAGATGCAG AAGACGGCTA TGCCACAGCA TCGGGAACTG TACACTTGTT GGCCGGTTGG GCCAAAGAGT TGGGCGTCAC GATTCCTGAA CTGACTGAAT CTCCCCACTG A
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Protein sequence | MSDETRLDRS RQWFDAAFDE LKASKTLLDN GSYAQSCFYA QQSVEKAMKG VMAADGKAIT THSIAKLMTN LPQDSQLDDM EPIRLDKFYI LTRYPESLPE GASIRQIFGR RDAEDGYATA SGTVHLLAGW AKELGVTIPE LTESPH
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