Gene AFE_1362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1362 
Symbol 
ID7135145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1177463 
End bp1177891 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content57% 
IMG OID643529757 
Productplasmid stability protein, putative 
Protein accessionYP_002425797 
Protein GI218667390 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00298137 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTGC TGGATACCAA CGTCTTGTCC GAGTTCATGC GCCCGGCCCC GTCCCTTCAG 
GTCGTGGCGT GGCTTGATGC ACAAGCGGCT GAGCAGGTAT GGGTCTGTGC CATCAGCCGT
GCCGAAGTTG AACTGGGTGT TGCCTTGTTG CCGGATGGAC AGCGCAAACT GGGGCTGCAA
GTGGCAGCCA GAGCGATGTT TTCTGAAGAA TTTGTCGGGC GTTGCCTGCC TTTCGACGAG
CAAGCGGCAA CCTGTTACGC AGGCATTGTG GCATCGCGTA CCCGCCTTGG GCGCCCTATC
AGTGTCGAAG ATGCACAGAT TGCAGCCATC GCCCTGACCC ATGGTTTGAC GCTGGCCACA
CGCAATGAAC GTGATTTTGC ATGGATTGAA GATCTTTCGG TCGCGAACCC CTGGCAGACA
GAGACATGA
 
Protein sequence
MILLDTNVLS EFMRPAPSLQ VVAWLDAQAA EQVWVCAISR AEVELGVALL PDGQRKLGLQ 
VAARAMFSEE FVGRCLPFDE QAATCYAGIV ASRTRLGRPI SVEDAQIAAI ALTHGLTLAT
RNERDFAWIE DLSVANPWQT ET