| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1357 |
|---|
| Symbol | |
|---|
| ID | 7135907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 1174696 |
|---|
| End bp | 1175847 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643529752 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_002425792 |
|---|
| Protein GI | 218666025 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.765434 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCG CTATTGTGCA TGACTGGCTG GTGGTTTACG CCGGAGCGGA ACGGGTCTTG
GAGCAGATGC TCACATGTTA TCCCGACGCA GATCTCTTCA GCTTGGTGGA TTTTTTGCCG
ACCGGTCAGC GCGCATTCAT CCGCAATAAG CCGGTCATCA CGTCTTTTAT CCAGCGCCTG
CCCAGGGCGC GCAAGAAATA CCGGGGCTAT CTGCCCCTCA TGCCCCTGGC CGTGGAGCAG
TTCGACCTCT CCGCTTATGA CCTGGTTTTG TCCAGCAGCC ATGCGGTGGC CAAGGGTGTG
CTGACCGGGC CGGATCAGTT GCATCTGTGC ATGTGCTATT CCCCCATCCG CTATGCCTGG
GACCTGCAGC ATCAGTATCT GCGGGAGGCG GGACTGGTGC GGGGCGTCAA GGGCTGGGTG
GCGAAGTTGA TCCTGCATTA TGTTCGTCTG TGGGATGTCC GCACGGCCAA TGGCGTGGAC
TGCTTCATCG CCATTTCCCA CTACATCGCC CGGCGCATCC GCAAGGTGTA CCGGCGGGAG
TCCAGCGTCA TCTATCCGCC GGTGGATGTG GCGGATTTTC CCATGTACCG GGACAAGGAA
GATTTCTACG TCACCGCCTC GCGCATGGTC CCTTACAAGA AGGTGGACCT GATCGTCGAG
GCCTTCAGCG CCATGCCGGA CAAGCGTCTG GTGGTGATCG GGGATGGGCC GGATTTCGCC
AAAGTCCGCG ACAAGGCGGG GCCGAACGTG CAATTGCTGG GCTTTGCGGG CGCGGAGGTC
CTGCGCGACC ACCTGCAACG GGCGCGGGCC TTCGTGTTCG CGGCGGAGGA GGACTTCGGC
ATCGCCCCCC TGGAGGCCCA GGCCTGCGGG ACGCCCGTCA TCGCCTTTGG CAAGGGCGGG
GCGCTGGAGA CCATCATCCC CCTGCCGGAG GCGGAGCGCG CCGGGTCGTC CCCCACACCC
ACCGGCGTAT TCTTTTACAA ACAATCCGCC GCGGCCATCA TCGCCGCCGT GGAGCGCTTC
GAGGAAGCGG GTGCGGCCAT CACCCCAGAA GCCTGCCGCG AAAACGCCCT GCGCTTCGCC
CCGGAGCGCT TCCGCGCGAA GTTCACCGCC TTCGTTGGGC GGGAGTGGGC AGCATTTCGG
GAGGACGCAT GA
|
|---|
| Protein sequence | MRIAIVHDWL VVYAGAERVL EQMLTCYPDA DLFSLVDFLP TGQRAFIRNK PVITSFIQRL
PRARKKYRGY LPLMPLAVEQ FDLSAYDLVL SSSHAVAKGV LTGPDQLHLC MCYSPIRYAW
DLQHQYLREA GLVRGVKGWV AKLILHYVRL WDVRTANGVD CFIAISHYIA RRIRKVYRRE
SSVIYPPVDV ADFPMYRDKE DFYVTASRMV PYKKVDLIVE AFSAMPDKRL VVIGDGPDFA
KVRDKAGPNV QLLGFAGAEV LRDHLQRARA FVFAAEEDFG IAPLEAQACG TPVIAFGKGG
ALETIIPLPE AERAGSSPTP TGVFFYKQSA AAIIAAVERF EEAGAAITPE ACRENALRFA
PERFRAKFTA FVGREWAAFR EDA
|
|---|
| |