Gene AFE_1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1297 
Symbol 
ID7135176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1130614 
End bp1131534 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content60% 
IMG OID643529693 
Productcobalamin biosynthesis protein, CobS family 
Protein accessionYP_002425733 
Protein GI218665179 
COG category[R] General function prediction only 
COG ID[COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0573751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACGG CAACACCTAC AATAGATCTT GGCGTAACCT TTGGCATCCC CGCTCTGGCC 
GGCAAGCAGT TTCCGGCCAA GGGTCTCACC GATCCCGGCG TTCCCGAGAT CATCAGTAAT
TACGTGTTCC GGCTGCCCTT GCTCCGCAAG GCGCTGATCT GGATGGACGG GAAGGCTGGT
CGCAGCATCT ACCTCGCAGG CCCCGCCGGA TCCGGCAAGA CCAGCCTCGC GGAGCAGATG
GCCGCGCGAC TGGGGTGGAT CTGCACCACA CTGTCGTGCA ACGTCCGTAC GGAGCGCGCG
GATATCGTAG GCTACATGGG ACTGGACGCC GGAAGCACCC GCTTCATTCC TGGCCCTTTG
GTGCGCGCGA TGCGCAACGG GGAGATGATC GTGTTTGATG AAGGCGACGC ATTGCCGCCT
TCCATCACGA TCACCCTCAA CAGGGTTCTG GAGGGATCCC CCCTGGTGAT TCCTGAAACG
GGTGAAGTGA TTCACCCGCA TAAGGACTTC CGGATCGCGT TCACGGGCAA CACCCGTGGA
CGTGGGGATG AGACGGGTAC CTACAGGGCC CGCAACGTAC AGGATGCGGC CGTTCTCGAC
CGGTTCCTGT TCCTGGAGGT TGGATATCCG ACCCAGGATG AGGAAAACGA CATCCTGGTC
GGAAAATTCG GCACGGCCCT TCCGGATGAA ATTCGGGAGA TCCTGCTGAA GACCGCGCAA
GAGAGCCGTG CGGCTTTCAT TGGCGGCGAA CTGTCCGCGC CGATCTCCAC CCGGGGACTG
GTTCGGATTT CCGAGTTGGT CAAGAGCGGC ATTTTCAGCG CCACGAACGA GCCGCTTTGG
GAGGCCATGT GCTTTGGCTT CGCAGACGGG CTGACCGAAG GAGAGAAATC TGGACTCCGC
TCCATCATGA AGCTCGGATA A
 
Protein sequence
MATATPTIDL GVTFGIPALA GKQFPAKGLT DPGVPEIISN YVFRLPLLRK ALIWMDGKAG 
RSIYLAGPAG SGKTSLAEQM AARLGWICTT LSCNVRTERA DIVGYMGLDA GSTRFIPGPL
VRAMRNGEMI VFDEGDALPP SITITLNRVL EGSPLVIPET GEVIHPHKDF RIAFTGNTRG
RGDETGTYRA RNVQDAAVLD RFLFLEVGYP TQDEENDILV GKFGTALPDE IREILLKTAQ
ESRAAFIGGE LSAPISTRGL VRISELVKSG IFSATNEPLW EAMCFGFADG LTEGEKSGLR
SIMKLG