Gene AFE_1260 details

Gene Information

• Locus tag: AFE_1260
• Symbol: ssb-3
• ID: 7135763
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 1103755
• End bp: 1104240
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 643529656
• Product: single-strand binding protein
• Protein accession: YP_002425696
• Protein GI: 218666983
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0616311
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGGTG TAAATAAGGT CACATTGTTG GGGCATCTGG GACGGGACCC GGAGATGCGT 
TATCAGCCCA GTGGCGGCGC CATCGCGAAC TTCAGCGTCG CGACTTCCGA GACCTTCAAG 
GACAAGGATG GCAACAAGCA GGAGCGCACG GAATGGCATC GTGTGGTGCT CTTCGGTCGC 
ATTGCAGAAA TCGCCGGTGA GTATCTGCGC AAGGGCAGCA TGGCTTACGT GGAAGGTCGC 
ATGCAGACGC GCAAGTGGAC GGACAAGGAA GGGCAGGAGC GCTACACCAC GGAGATCATC 
GGTGATCGCC TGCAGCTCAT CGGTGGCAAG AAGGAAGAGG GTGGCTCTGA ACACGCTCCC 
GCTCCGGCAT CGCGCGGTGG AAATACTCCT CCGCCCGTTG AGGATTTTGA CGACGAGGTC 
CCGTTCAGTT TTAACGGGTT AACGACTTAT GACGTTCCTC ATCTGACCCA TCGCGTCAAG 
TTCTAA 

 

Protein sequence

MAGVNKVTLL GHLGRDPEMR YQPSGGAIAN FSVATSETFK DKDGNKQERT EWHRVVLFGR 
IAEIAGEYLR KGSMAYVEGR MQTRKWTDKE GQERYTTEII GDRLQLIGGK KEEGGSEHAP 
APASRGGNTP PPVEDFDDEV PFSFNGLTTY DVPHLTHRVK F