Gene AFE_1212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1212 
Symbol 
ID7136084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1067359 
End bp1068516 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content63% 
IMG OID643529609 
Producthypothetical protein 
Protein accessionYP_002425649 
Protein GI218667701 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGTT CCATCGCCGA ACTCCTTGCC CACGGTCAGG CGCTTATCGC CGCTGATCTC 
CCCGAGGCGG TGGGAACCCT CCTGCATCCC TATCTGCAGG GGGGTACGGG CCCCATCCCC
CTCTGGAAAC TGTTGGCATT GGCCTGCCGC CGTCAGGGCA AGTTCGAGGC CGTACGCAAG
ATACAGGAGA TGATCGTCGA GACCCTCCCC GGTGATCTCC CGGCGCGCTA CGATCTCGCC
GATACCCTGC TTACCTTGGG GGACTTCGCG CGCGGCTGGG AAGAGTACCG ATTCCGCTAT
CATCTGCCGC ACACCACGGC CCTCGCCCGA CACATCCAGG CCGCCCCTCG TTGGGACGGA
CGCCCGATCT CCGGCCAAAC CCTGCTTATC CACGATGAAC AGGGCTATGG CGATACCTTT
CAGTTCATCC GCCTACTCCG TGCCGCCCAG AAAAACAGCG AGGCGAAGAT CCTGGTCGAG
ATCAATCACG AGTCCCTTTC TCTGATACGC CGGGCTTATC CCGAGTTCCT GGTACAGCCT
CGGGGAACGC TGCCGCCGCA CTTCGACGCC CACTGCGAAC TGATGAGCCT TCCCCACGCC
CTGGGCCTGC AGCTCTCGGA TCTGCCCCTG GAGATGCCCT ATCTACAGGC CGACCCCAGG
CGAATCGAAC ATTGGCAAGA GCGCTTGCAA GACCTCCCCC GCCCCTGGGT CGCCCTGACC
TGGGCAGGGC GACCTACCCA TCCCAACGAT GGCAACCGCT CCATGCGTCT GGAGCAATTC
GCTTCTCTTG CCATGGTCGC TGCTTCCTTC CTGGCCATCC AGAAAGGACC GGCAGCCTAC
CAGCCTGCCC CAACAGGCAT GAATTTATGC CGCCTGAGCG ACGAGATACG CGACTTCGAG
GACACCGCCG CCATTCTGCA GATCGCCGAT TTGCTGATCT CCGTGGACTC TTCCCCAGTC
CATCTGGCCG GGGCCCTCGG CCGCCCCGCC TGGGTGCTGT TACCGTTTGA ATCTGAGTGG
AGATGGATGA CGGAGCGGGA GGACACCCCT TGGTACCCCA CCCATCGCCT GTTCCGGCAA
TCCCGCAGAG GGGATTGGCA AGGGGTGCTG GAACGAGTGG CTGTCGATTG GGTGGCCTCA
GAATATTCTC CAGCGTAG
 
Protein sequence
MKRSIAELLA HGQALIAADL PEAVGTLLHP YLQGGTGPIP LWKLLALACR RQGKFEAVRK 
IQEMIVETLP GDLPARYDLA DTLLTLGDFA RGWEEYRFRY HLPHTTALAR HIQAAPRWDG
RPISGQTLLI HDEQGYGDTF QFIRLLRAAQ KNSEAKILVE INHESLSLIR RAYPEFLVQP
RGTLPPHFDA HCELMSLPHA LGLQLSDLPL EMPYLQADPR RIEHWQERLQ DLPRPWVALT
WAGRPTHPND GNRSMRLEQF ASLAMVAASF LAIQKGPAAY QPAPTGMNLC RLSDEIRDFE
DTAAILQIAD LLISVDSSPV HLAGALGRPA WVLLPFESEW RWMTEREDTP WYPTHRLFRQ
SRRGDWQGVL ERVAVDWVAS EYSPA