| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1203 |
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| Symbol | tnsC-1 |
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| ID | 7136870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1042142 |
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| End bp | 1043800 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643529600 |
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| Product | Tn5468, transposition protein C |
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| Protein accession | YP_002425640 |
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| Protein GI | 218666365 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACCA CGGCGGATGA GGACCTCACG TTGCCCGAAT ATCGGGATAA CCCCTTTATC
GCGAAATTGC CGCCTCCCAT GTCAACGCAT GACGCCTTGC TGGCCATGGC GGCTCCACCC
ACCTTCAACG CGGCGGAGCG CGGTTATCCC GCGCATCTGC GCGCCCATTG CATCTCGCGG
CTTAAAGGCT ATTTTGAGCC GCTGGAAACC CACCTCAGCC TGGAAGCAAA ATTTGGCCTT
CTGATCCGTC AAGGTTATCT GTGCCGCAAC CCCACCACGG CTGACTATAC CCGCCGCGTC
CGGGAAGGCG CTACCCGGGT ATTTGAAAAG GATCTCATGG CCGGCGGACG TTCTGTCCGG
TCAACCGCGA GCAGTTTTGC GCTGATTGGA TGTTCCGGCA TCGGCAAAAG CTACGGCATG
GCCAGAATAT TGGAGTTATA TCCGCAAAAA ATTCACCATG CCGAGCCCCG CAGTATCGAC
CAAGTGGTTT GGCTCAAGCT GGATAGCCCG CACAAGGGGT CGCCCAAGCA GCTTTGCATC
AGCTTCTTTC GGAGCATGGA TGACTTGTTG GGCACGCGTT ATAGCGCGCA ATTTGGGAGT
AGCCGGCGAT CCGTCGATGA GATGATGGTG CATATGGCGC ATGTCGCGAA CCTGCACGCA
TTGGGTGTGC TGATTGTCGA TGAAATCCAG CACATTCGGG AAGCGCCAGG TGCTGGGGCC
GAAGCGCTGT TGAACTTCCT CGTGACCCTG GTGAATACCA TTGGTATCCC GGTGATCCTC
ATCGGCACGA TGGGCGCGCT GCCCCTGTTG CAGGGAGACT TCCGGCAGGC ACGTCGCGCG
AGCGGTCTGG GGAGTCTGGT TTGGGAGCGC ATGGAGAACG AGCCGACCTG GAATTATTTT
GTCGAGCGAA TGTGGGCCTA CCAGTGGACG CGGGAGATAT CGCCGCTTAC CGACGAAGTC
CGTCAGGTGT TATATGAAGA GAGCCAGGGG ATTGTGGACG TGTTGATCAA TCTCTTCATG
ATGGCGCAGC TGCGCGCCAT TCAGCTCGGG GTTCTGAACC GTCGCCCTGA ACGTATCGAC
GCTGGTCTGC TGCGACAGGT GGCTAGTGAG CACATGCGGC TTATCGCGCC CATGATCAAT
GCGTTGAAAC GTGGGGATCG CGAGGCGATC GCACAATATG ATGACATCCG CCCCATGCAG
GACCAGGTTC TGCAGGTGTT CAGCGACGCG CTGAGTTGCA TGCCAGGGCA ACCTGTCCTC
GCCACCCGCT CTCCGGTGGC TTCGGTCACG ACCGAAAAGG CGGCAAGCAC GAATCTGGAT
GTGCGCGGCA TCCTTTTGCC TATTTTGGAA CAGCTCGGGT TGGCTGGGGA CATCGCGGAA
ATCCTGGTGG CGGAAGCCGA AACAGAGCAT CCGGGCCTGT CTGCGCTAGA TCTCGTGGGC
ATTATTACGG CTAAATTACG TGATCGCGTA CCCGCCAATC CCTCTAAGAA ACCGCGCAAG
TCGACTACAA GCGCTACTAA AACCGCGAAA ACACCACTTC CCGTGGATGC GCAGGACCTC
CGGACGATCA TCTCGGCCAA AAAAGAGGGC GTATCCGCTT ACGATGCATT GCTTGCGGCG
GGCGCCGTTA AACCGCCGAT GGCCGATCTA GCGAGCTGA
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| Protein sequence | MTTTADEDLT LPEYRDNPFI AKLPPPMSTH DALLAMAAPP TFNAAERGYP AHLRAHCISR
LKGYFEPLET HLSLEAKFGL LIRQGYLCRN PTTADYTRRV REGATRVFEK DLMAGGRSVR
STASSFALIG CSGIGKSYGM ARILELYPQK IHHAEPRSID QVVWLKLDSP HKGSPKQLCI
SFFRSMDDLL GTRYSAQFGS SRRSVDEMMV HMAHVANLHA LGVLIVDEIQ HIREAPGAGA
EALLNFLVTL VNTIGIPVIL IGTMGALPLL QGDFRQARRA SGLGSLVWER MENEPTWNYF
VERMWAYQWT REISPLTDEV RQVLYEESQG IVDVLINLFM MAQLRAIQLG VLNRRPERID
AGLLRQVASE HMRLIAPMIN ALKRGDREAI AQYDDIRPMQ DQVLQVFSDA LSCMPGQPVL
ATRSPVASVT TEKAASTNLD VRGILLPILE QLGLAGDIAE ILVAEAETEH PGLSALDLVG
IITAKLRDRV PANPSKKPRK STTSATKTAK TPLPVDAQDL RTIISAKKEG VSAYDALLAA
GAVKPPMADL AS
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