Gene AFE_1152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1152 
Symbol 
ID7136201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1025907 
End bp1026452 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content61% 
IMG OID643529549 
ProductHNH endonuclease domain protein 
Protein accessionYP_002425624 
Protein GI218665243 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGATG TATTGCGGCT TGATAGTGCT GGCAATCCTC TGCACTGGAT TGGCCAGGAG 
GAAGCGGCAG GCTATTACGC CAAAGGGATG GTGGTCTGGA CGCTGGGGGA GCCGTTCCGG
ATCCTGCATG GCGGGCGCAA CCGCTTCACG GGGCTGCAGT CGCACATGGA CATCCATCCG
GTTATCTCGG TGCGGGGAAC TCCGTGGACC CGGTGGCGGG TACCAGCGCT CACCAACGCG
GCACTGTTCC GGCGCGATGG CCACCTGTGC ATGTATTGCG GACGGCCGTT CAAGGACCGC
GATTTGACCA GGGATCACAT CATCCCGACC AGCAAGGGTG GCAAGGACAT CTGGACCAAC
GTGGTGGCCG CTTGCAAGCG GTGCAACAGC CACAAGGGGG CCATGACGCC GGAGCAGTCC
GGCATGAAGC TAATCGCCGT GCCATACACC CCTAACCAGT ATGAATTCCT GTACCTGACC
GGACGCAGGA TTCTGGCTGA CCAAATGGAG TTTCTGCGGG CTGGGTTTCA CCACTTGCAT
GCTTAG
 
Protein sequence
MADVLRLDSA GNPLHWIGQE EAAGYYAKGM VVWTLGEPFR ILHGGRNRFT GLQSHMDIHP 
VISVRGTPWT RWRVPALTNA ALFRRDGHLC MYCGRPFKDR DLTRDHIIPT SKGGKDIWTN
VVAACKRCNS HKGAMTPEQS GMKLIAVPYT PNQYEFLYLT GRRILADQME FLRAGFHHLH
A