Gene AFE_1127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1127 
Symbol 
ID7136592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand+ 
Start bp1010179 
End bp1010730 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content60% 
IMG OID643529524 
Productnucleoside 2-deoxyribosyltransferase family protein 
Protein accessionYP_002425599 
Protein GI218667324 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG3613] Nucleoside 2-deoxyribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.943646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGAA AGAAGCGTAT CTACATCGCC GGCCCCAATC TGTTTTACGC CAACTGGCCA 
ACCTTTGCCT CCCAGGCCCA GACACTATGT GCCGAGCATG GCCTGGAGGC GATTCTGCCG 
GTGCCGGCCA CCGTGCTGAC GGGGCCTGGG GTCACTGAAT CGTCCAATGC GGAGGCGGCC 
AACAAGGTGT TCCAGGCTTG CCTGAATGCG GTGCGAAGCG CCGATGGGGT CATCGCTAAC 
CTGTCTTCAT TCCGTGGGTC AGAGCCGGAC AGTGGCACGG TCGTCGAATG CGCCGTAGCT 
CACACCCTGG GCATTCCGGT CATCGGCTAC ACCAACGGCG ATAATCCCCT CATCCGATCA 
GGAACGGACG CCGAAGGACG TGTATTAGCT GAGGACGGCG GCTGGATCGA GCAGTTCGGG 
CTTTCGCATA ACGTCATGCT GCACGGCGTC TGCCTGGCTA TCGTGGAGGA TCCGCGAGAG 
GCGGTCTCCA TGATGGCGGA ACTGCTGGAG AGGCGAAAAA AACACAGCAA GAAAGCTGTA 
TCGGTTGATT AA
 
Protein sequence
MSGKKRIYIA GPNLFYANWP TFASQAQTLC AEHGLEAILP VPATVLTGPG VTESSNAEAA 
NKVFQACLNA VRSADGVIAN LSSFRGSEPD SGTVVECAVA HTLGIPVIGY TNGDNPLIRS 
GTDAEGRVLA EDGGWIEQFG LSHNVMLHGV CLAIVEDPRE AVSMMAELLE RRKKHSKKAV 
SVD