Gene AFE_1082 details

Gene Information

• Locus tag: AFE_1082
• Symbol: traV
• ID: 7137304
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 974940
• End bp: 975437
• Gene Length: 498 bp
• Protein Length: 165 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643529479
• Product: conjugal transfer protein TraV, putative
• Protein accession: YP_002425554
• Protein GI: 218665949
• TIGRFAM ID: [TIGR02747] type IV conjugative transfer system lipoprotein TraV

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.53395
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGATCC GTTTTGCATT GGCCAGTGCC ATCATCGCTC TCGGCGGATG CGCGACGTCG 
CATCCCTGTA TTCATGGGAA AGGCGGGGTA TGCGTAGGCC CACGGGAAAC CTGGGGCATC 
ACCCGGCATC GGGATCAGGT GAATCCCGAC AAGCGCACGT TGAAGGCGCA GAATGAGGCC 
CGCAAATTGT TGCACACCTC ACCCAGCGCG CGTGACCAGC TTCCCAACAT CCACCCGCAG 
ACCGCCCCGT CACAGCAAAC GCTTGACGGT GGTAAAGCTG CTCAATATAC TACAGGAAAT 
CAGCCTTTAC AGGCTCCGAC CGGATATCCG AAACCGTTGC TCACGCAACC CCGGGTGCTC 
AGGGTCTGGG TCGCACCTTA CCGTGGTCCG GAAGGCAATC TGCATTTTCC GGGCATGGTT 
TACTCCATTA TTCAGCCACA AAGTTGGACC TTGGGACATG GTTCGTCCCA TGTGCCAATC 
CCGGTCGCTG ATTATTGA 

 

Protein sequence

MKIRFALASA IIALGGCATS HPCIHGKGGV CVGPRETWGI TRHRDQVNPD KRTLKAQNEA 
RKLLHTSPSA RDQLPNIHPQ TAPSQQTLDG GKAAQYTTGN QPLQAPTGYP KPLLTQPRVL 
RVWVAPYRGP EGNLHFPGMV YSIIQPQSWT LGHGSSHVPI PVADY