| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1080 |
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| Symbol | traK |
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| ID | 7136732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 972143 |
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| End bp | 973315 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643529477 |
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| Product | TraK lipoprotein, putative |
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| Protein accession | YP_002425552 |
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| Protein GI | 218665218 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGCGCA GGACCGTAGT CATCGCGTTG TGCGGGGCCC TGGGCGCCTG CGTTTCTTCT
CTGGCTGACG CCAACGCCTT TGTGCAGGGC GCCCAGCCGG CGTTTCCGAC CAGTCCGGTG
CCCATGCCGC CCTCTCCGGC ATTCAAGAGC CTGGGCACCA TCCCGTCGGC CCCGACGCCA
GGAGGGGTAA CGCTTCCGGC CCAGGATCAG ACCGCCGTCG AGGCGGAAGT GAGAAGGGCG
GAGGCCGCTG CCAATCGTCC CAGTCAGCCA GCGGATGCTG GCCTGCCGCC GCAGTCCTTC
GGGCGAACGC CCGCCGCCGT CCCGGTCACG GGTTATGCGG GAGCGGGCCG ATTGCCAGCG
CCGTTGCCGT CTGGTGGTTT TGTTCCTCCG CCGGCGGGCG CGTCTCCCCA AATGATCTCC
GGGTACGCGA ACAATATGGG CGGAGAGGAA GAGCCGCCGC ACATGAGTAT GAGCGCCGCC
TTAAAGGACG GCACAATGGT GCGGCAGCAG AACATCCGGG TGCATTCCGG AAAAACGTAC
TCCATCATCG TCAGCGGTGT CGCTCCGAAC CTGATCGAGA CGCCTTTTCG CCATCCGGAG
ATGCTGGTGA CCAACAGCAA GCTGGCGACA CCTATCGTGC ATGGCCAGAA CCTGGTGGTT
TCCACGACGC CGGCATTCCC GGTCGGCGTT TATGTGACGG GCAAGAACCC GCATGACCCG
ATGATTTCGC TGACCATGAT CCCTAAAAAG ATTCCGCCGA AGAATTACCG GCTGATCATT
CCGGGATTCA TTCCCTCGGT GGCGCCAACC GTCACCGGTC AGAGGTCCGG GTATGCGCAG
CGCATGGTGC ATTTGATGCG GGACGCGGCG TTGAAGCAGG TGCCGGAAAA CTATCGGCAG
TCGCATAAGC GGCTGGCGTT GCCGGGGCCC GGCGGCGCGT TCTCCTGGAC TTGGGAATTT
TCCTGGGTAG GCAACCGGTA CCGGATTACG GCCTATTCCC TGAAAAACAC CCTGGTTGGG
CCAGTGAACC TGATGGAAAC GAATTTCTAC GCGCCTGGCG TCCTGTCCGC CAGCGTGTAT
CCGCATCACC ATCTATATCC GGGCGAGAAA ACGCAGGTTT TTGTGATCAC GAAACTGACG
GCGGCGCACG GCACGCTCGG GGGTGTTTCT TGA
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| Protein sequence | MKRRTVVIAL CGALGACVSS LADANAFVQG AQPAFPTSPV PMPPSPAFKS LGTIPSAPTP
GGVTLPAQDQ TAVEAEVRRA EAAANRPSQP ADAGLPPQSF GRTPAAVPVT GYAGAGRLPA
PLPSGGFVPP PAGASPQMIS GYANNMGGEE EPPHMSMSAA LKDGTMVRQQ NIRVHSGKTY
SIIVSGVAPN LIETPFRHPE MLVTNSKLAT PIVHGQNLVV STTPAFPVGV YVTGKNPHDP
MISLTMIPKK IPPKNYRLII PGFIPSVAPT VTGQRSGYAQ RMVHLMRDAA LKQVPENYRQ
SHKRLALPGP GGAFSWTWEF SWVGNRYRIT AYSLKNTLVG PVNLMETNFY APGVLSASVY
PHHHLYPGEK TQVFVITKLT AAHGTLGGVS
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