| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1078 |
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| Symbol | traL |
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| ID | 7136480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 971257 |
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| End bp | 971535 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643529475 |
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| Product | type IV conjugative transfer system protein TraL |
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| Protein accession | YP_002425550 |
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| Protein GI | 218666959 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02762] type IV conjugative transfer system protein TraL |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.301516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAACCCG TGAGGATACC TAATCACTTT GATGACCAGC GCCAGATCCT GTTTTGGGAC
ATCGACACCC TGGCCGTGGT CATTATGTTT TTCATCATCG GATATGTGCT GCGCGAGTTG
ACCATCATGA TGGTGCTGGC GTTTTTTGCG GGCCATCTGT TTTCAAAATG GAAGACCAAT
CAGCTCAATG GAGTTCTGAT CCATCTCAGC TATCGGTTCG GATGGTGGCG CATCAACGAT
GTTTTCAAAA ACGGCAATAC GAAGGAGTGG GTCGATTGA
|
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| Protein sequence | MQPVRIPNHF DDQRQILFWD IDTLAVVIMF FIIGYVLREL TIMMVLAFFA GHLFSKWKTN
QLNGVLIHLS YRFGWWRIND VFKNGNTKEW VD
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