Gene AFE_1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1053 
Symbol 
ID7136196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp947846 
End bp949570 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content56% 
IMG OID643529450 
Producthypothetical protein 
Protein accessionYP_002425525 
Protein GI218665835 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0944363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAG ACGCTATTTC AAGTATGCAA AGACTGCTGT GCGATCGGCC CGTATCTGTC 
GCCTGGAGCG GCGGAAAGGA CTCAAGCGTG GTCCTGAACC TTACCATGCA GGCTGCGAAG
GCGGTTCTCG AAAGCGGTCA AACCATAGCC GCACCCATCC TCGTGACCCA TGGGGATACA
GGTATCGAGA ACCCGGAAAT ACGCGCCTAT GCAAGCACTG AAATCGGCCG TTTGCGCCGG
TACGCCGAAC GGCATCGTAT TCCTCTGGCA GTTCATGTCG CCACGCCAAA TCTCACAGAG
TCCTGGCCGC TTCGGGTGAT CGGTGGCCGT GCTCTGCCGT CTTTTCCAGG CATGAATCAT
GACTGCACCA CGGATCTCAA AATTCATCCG ATGCAGCGTT TGCGCAAGCG ATTACAGAAT
CCGAAAACGG CCGCTTCTCT GGTTACCATC ATCGGAACCC GTTTCGAGGA AAGCCCGCAA
AGGGCAGCCC GCATGCTCGA GCGCGAAGAA ACGGCGGATA AACCATGGCT CGGGGACGAC
AATCAATGGT ATCTGTCACC GATCGCCTAT TGGACCATGG AAGAGGTTTG GGAATACCTG
GGGCAGTGCC GCGACGGGAA TCCGGATGTA CTGACGTTTT CTCGATTTGA AGAGGTCTTT
CGGATCTACG CGGACGCGGC TGGATCTTCC TGCGCAGTGG TCGGAGACAT GGCGACCAAG
GGACAAGCCA AACCCTGTGG TGCCCGCACT GGTTGTGCGG TCTGCACGCC GATTGGCCGG
GACAAAAGTC TCGAAGCCAT GATCGAGGCT GACCCGCGCT ACCACTATTT GCTGGGCCTG
AATCAGTTGC AGCGTTTCTT GCTCAACACC CGTTGGGATT TCACTCGTCG CAACTGGATG
GGCCGCAGCG TGGATGCGGA AGGATATATC ACGATTGCGC CAGATGTGTA TTCGCCGGAC
ATGCTGCGGG ATCTCTTGCG CTATGTACTG ACCATTGACG CTGTAGAGGC AGAAACCGCT
CGCGCCGAGG GGCATGCACC CCGGTTTCAG TGGATCGATC CGAAAATACT GTTGGCGATC
GACGCGCAAT GGAGTCTGTA CGGGTATCAC CCGGCTTTTG AAGCGTTGCG AATATTCCAT
GACGTCCACG ATCTGGGCCG CCGCTATCCG GTTCCGGATG TGGATGCCTG GCCGCAACAG
CCCATGCCCC GCAAACAGCG GTTGTATGTG GGCACACCCT GGGAAGATCA GCAGGACTTG
CAGGGCTATC GGGATATCCA GCAAGAGATC GCCGTTGGTT CCGATAGTCC TTGCATGGGG
ACGCGGCGAC TCGCGAACGG CCATGTCGTT ATGGATGTGG AAAGTAGCGT GGCATTCGAT
TTTGATGATG AGGGGGTTGC AGACTTCTTC GGGCTGGAGT ACGACGCCAT TCTGGAAGAT
TTGCAAGATG GTCGGGATTT TGGATGCTGC GGTTCCTACC TGTATTACTC CCGTATGGGG
ATGTTGTCTG TTGCGCCACA AGCCATTGCC ACCATAGACA AGATCATGCG CCGCACCCAA
TGGTTGTATG CCAAAGGGTG GAATGGACAG CGTCAGGTGG AATTTTTGCC GCATCGATCC
ATCCGACCAG AAAAAGATGG GATGACCGGA CCATTGCCGC TTCACGAGTC GTTCCTGGAA
CATCATTTGG ATACTGGACA GAAACAGCAG GAGCTGGTGG CATGA
 
Protein sequence
MNKDAISSMQ RLLCDRPVSV AWSGGKDSSV VLNLTMQAAK AVLESGQTIA APILVTHGDT 
GIENPEIRAY ASTEIGRLRR YAERHRIPLA VHVATPNLTE SWPLRVIGGR ALPSFPGMNH
DCTTDLKIHP MQRLRKRLQN PKTAASLVTI IGTRFEESPQ RAARMLEREE TADKPWLGDD
NQWYLSPIAY WTMEEVWEYL GQCRDGNPDV LTFSRFEEVF RIYADAAGSS CAVVGDMATK
GQAKPCGART GCAVCTPIGR DKSLEAMIEA DPRYHYLLGL NQLQRFLLNT RWDFTRRNWM
GRSVDAEGYI TIAPDVYSPD MLRDLLRYVL TIDAVEAETA RAEGHAPRFQ WIDPKILLAI
DAQWSLYGYH PAFEALRIFH DVHDLGRRYP VPDVDAWPQQ PMPRKQRLYV GTPWEDQQDL
QGYRDIQQEI AVGSDSPCMG TRRLANGHVV MDVESSVAFD FDDEGVADFF GLEYDAILED
LQDGRDFGCC GSYLYYSRMG MLSVAPQAIA TIDKIMRRTQ WLYAKGWNGQ RQVEFLPHRS
IRPEKDGMTG PLPLHESFLE HHLDTGQKQQ ELVA