Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1047 |
Symbol | |
ID | 7136052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 943788 |
End bp | 945923 |
Gene Length | 2136 bp |
Protein Length | 711 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643529444 |
Product | helicase, RecD/TraA family |
Protein accession | YP_002425519 |
Protein GI | 218667869 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.604739 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGAAA TGCAGACGCT CATCGGCCAG GTCACCCGCC TTATCTTCTC AGGCAAGGCG GATTCCTTTC GCATTTTTGA GGTGCAGATC AAGGGCGCGA ACAAGCGCGA GATTGTCACC GGCGAGTGGC AACGGGCCCG TGTGGGCGCG AACATCGAAG CGGCGGGAAC CTGGGAGAAG CGCAAAGGAA AGGATGAAAT TCAGTTCAAA GCCCGTTCTA TTCTGGAAAT CGTACCGACA AGCGCCGACA GCATTTTGTC TTGGCTTGAG GGCGGGGCGG TAAAGGGCAT TGGCAAGGTG TCCGCGAAAA AGCTGGTGGC CTGCTTCGGC GCTGGATTGC TGGAGATTCT GGACCAGCAT CCAGAACGGA TCGTGGAGGC CGGTATCGGC AAGAAACAGC GCGAAAAGAT TATCGAGGGC TGGAAAATCG CGTCCGCCAC CAGAATCATC ATGCAGTTTC TTCGGGAAGT CGGGATTGGC CCGGAACGCT CCAACGCGGT ATGGCGCCAG TTCAAGGATC ACCCCGCCAT CGCTGGCCAG CCGGCGGTGC TGGTGGCCCG GCTGCGCAAC AACCCCTATC GCCTGATCCG CGTGCGCGGC ATCGGGTTCT CGTTGGCCGA CCAGGCGGCC GGCAAACTGG GCATTCGCGC CGACGCGGAT TATCGGGTGG ACGCGGGGAT CGAGCACACT CTGCAAACTC GCACCGAAGA CGGTCACGTT TGGACTCCCG AGCCGACGTT GCTGGGCCTT TGCAAAGAAT TGCTGGGCGT CAGCCAGGAA AAGATCGTGG CGCGCATCCA GGTGATGCAG GAAGCACAGC AGATCGCGAC TGAACTGGGC GCGCCTAATC GCTTCGCCAG CGTACGTCTT TCCAGAATGG AAATTTCCCT GGCGGCCAAG ATTCGCTCCC TGTCTGGTCC GGCGCCCAAG AAAACGATGC GCTTCCCCGC CGGATTCGTT CCGGATCCCA CGCAAATCGA GGCGCTGAAC CAGATCAGCG ATCGCAAGCT GGCGATTCTG GCCGGCGGGC CAGGCATGGG AAAGACCACC CTACTCAAGA CCTGCGCACA GTCGGCAGTG GCGAGCGGCA TGAGGGTTGC TCTTTGCGCC CCAACCGGCC GTGCGGCCAA ACGCATGAAC GAGGCGACGG GCATGGAGGC CAAGACCATT CATCGGCTGT TGGAGATGAA GAGGGGTGGG CTGGCGGAGC GTAATCGGGA CAACCCTATC GAAGCGGACT GGATCATCGT GGACGAGGTC TCCATGCTGG ATATGGAGTT GGCCTGGAAG CTGTTTGACG CCATTCCGGC CCGTGCCCGC GTGCTGCTGG TCGGCGATCC GGACCAGTTG CCTTCCGTGG GCCCCGGGCA AGTTCTGGCC GATCTCATTG CCTGCGGCAA GGTTACGGTG GCCAGGTTGA GCAAGATCTT CCGGCAGCAA GCCGGGTCCG GTATTCCGGT GATGGCCACC CAGGTCATTC AGGGCGTCGT GCCGAACCTG GATCCCGATT CGTCGGATTG TCCGTTCGTG GATGCAGAAT GCATCGGGGA AGAAAGCGAG GAGGCGACAG CGGTGGTGGT GCGGCGCATC GTCCAAGAGT CGGAAAAACT GGGCAGCCGC ATGCAGGCGC TGGCGCCCAT GCGGAACGGT CCGCTGGGCA CGCTGAAGCT CAACCAGGCC TTGCGTGAGG CGTTCAACCC GGATGCCGGG CAGCCGCACC GGGGCCGGTT CCGGCTGGGG GACTGGGTAA TTCAGACGCG CAACAACTAC GACCTGGATG TCTATAACGG CGATCTGGGT ACCGTGGTGG CCATAGAGGA GGGCGACGAA CAGGCCGTGG TGGTGGATTT CGAGGATCGC GTCGTCCGCT ATGAGGATAA TGAGGACTTG CGGGATCTTG ATCACGCGTA TTGCCTGACC ATCCACAAGT CCCAGGGTGG CCAGTTTCCC GGGGTCGCCA TGGTGGCCAC TACCGCGCAC TTTGTCATGC TCAAGCGCAA TCTGCTGTAC ACGGGCATGA CGCGGGCCGA GAAGCATCTG CTGCTGATCT CGACGAAAAG GGCCCTGCAG ATCGCGTGTA AGAAATCCGG CATTGAGAAG CGGGACACGC TGTTGGCCCA GAGGATCGGC GGATGA
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Protein sequence | MPEMQTLIGQ VTRLIFSGKA DSFRIFEVQI KGANKREIVT GEWQRARVGA NIEAAGTWEK RKGKDEIQFK ARSILEIVPT SADSILSWLE GGAVKGIGKV SAKKLVACFG AGLLEILDQH PERIVEAGIG KKQREKIIEG WKIASATRII MQFLREVGIG PERSNAVWRQ FKDHPAIAGQ PAVLVARLRN NPYRLIRVRG IGFSLADQAA GKLGIRADAD YRVDAGIEHT LQTRTEDGHV WTPEPTLLGL CKELLGVSQE KIVARIQVMQ EAQQIATELG APNRFASVRL SRMEISLAAK IRSLSGPAPK KTMRFPAGFV PDPTQIEALN QISDRKLAIL AGGPGMGKTT LLKTCAQSAV ASGMRVALCA PTGRAAKRMN EATGMEAKTI HRLLEMKRGG LAERNRDNPI EADWIIVDEV SMLDMELAWK LFDAIPARAR VLLVGDPDQL PSVGPGQVLA DLIACGKVTV ARLSKIFRQQ AGSGIPVMAT QVIQGVVPNL DPDSSDCPFV DAECIGEESE EATAVVVRRI VQESEKLGSR MQALAPMRNG PLGTLKLNQA LREAFNPDAG QPHRGRFRLG DWVIQTRNNY DLDVYNGDLG TVVAIEEGDE QAVVVDFEDR VVRYEDNEDL RDLDHAYCLT IHKSQGGQFP GVAMVATTAH FVMLKRNLLY TGMTRAEKHL LLISTKRALQ IACKKSGIEK RDTLLAQRIG G
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