| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1039 |
|---|
| Symbol | csf2 |
|---|
| ID | 7134289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 938138 |
|---|
| End bp | 939199 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643529437 |
|---|
| Product | CRISPR-associated protein, Csf2 family |
|---|
| Protein accession | YP_002425512 |
|---|
| Protein GI | 218666329 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03115] CRISPR-associated protein, Csf2 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGC GTTTTTCTGC GTTTATTCGT ACCCGGTCCC CATTGCACAT TGCCGCTCCC
GGCAGCATGC GGTTTGATCC AGCCACGGGA AAGACCGTCT ATGGCGGGCA GAGCGTTGGC
GTGCCTTGTA CGGGCATCCA GCGTGAAGTG TTGTTCAACG AAGCGGGCGA GGCGAAGCAC
TTTCCCGTGA TCGCCGCCAA CAACATCTCC GGCCGTCTGC GCCGGCATGC CGCGCGCATC
ATCCTGGAAG CGATCCGGTT GCGCGGGCAG AAGGTTTCCC TGGCGGTCTA TAACGTCCTG
CAGTGTGGCG CGGTAACGGG TAATCCGGAT GGCAAAGACA TGACCCTGGG CGAATACCGG
CAGTATCGGG ACGATCCCTA CTTTGGGCTG TTCGGCGGCG GTCCGAAAAT GATGCGGCGC
TGCCTGGAAG TCGAAAACGC CTTGCCGGTT CACGCGGATA CCACGGCGAA TCTGGGCAGC
ATGGCGCATC CACACGCTCA CCGGCATGCC CAGGGCGATC ACTTCACCGA CGTCTGGGGC
TTTCGCCGCA ATGATGATTT GCGGGATCTG GTCAACATCC ACCAGGCTGC GGAAGTGGTG
GAGAACTTTG AGGCGGAATT CAATGCCCGG CAGCAGGCTA TTTTGGGCGA GGTCGATCGC
GAGAAAGGCT CCAGCAAGAC CAGTGTGAAA ACCTATTCGG CACTGGAGTT CGTGCGCCCG
GGAACGCTGT TCGATTTTTC CATCCTGATG AAGTGGGCCA TCAGCGATGC CCAGGCCGGC
CTGTTTCTGC TCACCCTGGA TAGCCTGGCG GAGACGGAGC GGCTGGGCGG ATACGGGCGT
AACGGATTCG GTCGCTTTTC GTTCGACGAT GCGATCTTGT TGACCAGTGA TGGGAAAGAA
CACCAGGATG CGTTCCACGA TGGCCGCCTG AATCGCGAGG ATCCTCTGGT GGCCCATACG
CTTTCCGCCT GGCATGCCGC GTCTCAGAAA ATCGACGCCA CGGCGTTGGC CAACCTGATC
GCCCCTGACC GGGGTGCGGC CCCTGACCGG GGTGCGGCGT GA
|
|---|
| Protein sequence | MIKRFSAFIR TRSPLHIAAP GSMRFDPATG KTVYGGQSVG VPCTGIQREV LFNEAGEAKH
FPVIAANNIS GRLRRHAARI ILEAIRLRGQ KVSLAVYNVL QCGAVTGNPD GKDMTLGEYR
QYRDDPYFGL FGGGPKMMRR CLEVENALPV HADTTANLGS MAHPHAHRHA QGDHFTDVWG
FRRNDDLRDL VNIHQAAEVV ENFEAEFNAR QQAILGEVDR EKGSSKTSVK TYSALEFVRP
GTLFDFSILM KWAISDAQAG LFLLTLDSLA ETERLGGYGR NGFGRFSFDD AILLTSDGKE
HQDAFHDGRL NREDPLVAHT LSAWHAASQK IDATALANLI APDRGAAPDR GAA
|
|---|
| |